Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC011493.1-201ENST00000596753 1632 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC023421.1-201ENST00000590535 1785 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 ANKRD36P1-201ENST00000344424 659 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 U3.2-201ENST00000362981 210 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RNU4-28P-201ENST00000364739 141 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RNU6-185P-201ENST00000384421 107 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RNY3P9-201ENST00000384727 106 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RPL23AP17-201ENST00000401064 499 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AL009179.1-201ENST00000406085 265 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 VTA1P1-201ENST00000414044 866 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RPL22P18-201ENST00000417197 377 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RBMY2KP-201ENST00000418221 992 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC073143.1-201ENST00000436316 395 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC073850.1-201ENST00000449243 255 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 snoU13.29-201ENST00000459370 104 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 TRBV5-2-201ENST00000489095 273 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 MTCYBP35-201ENST00000503630 1137 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC092593.2-201ENST00000513866 913 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 HMGB1P1-201ENST00000522557 636 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 MRPS36P5-201ENST00000551909 298 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 OR4U1P-201ENST00000554958 912 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 RBM22P1-201ENST00000578589 1214 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 CCDC58P3-201ENST00000590792 430 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC008751.2-201ENST00000597885 980 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC018809.2-201ENST00000602436 3823 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC123767.1-202ENST00000620407 817 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC006840.1-201ENST00000623069 542 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AP002799.1-201ENST00000623552 423 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 AC005224.3-201ENST00000584683 2140 ntBASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC187A0A096LP49 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 SNORD116-2-201ENST00000384274 95 ntBASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 RNU1-106P-201ENST00000384382 164 ntBASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 SNORD116-6-201ENST00000384711 96 ntBASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC187A0A096LP49 AL365220.1-201ENST00000432923 399 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms