Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 DDX18P3-201ENST00000404856 2007 ntBASIC7.64□□□□□ -1.19
LHX6Q9UPM6 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LHX6Q9UPM6 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 ACTBP13-201ENST00000423971 3959 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC009090.4-201ENST00000623921 3691 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC006213.6-201ENST00000623722 4179 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC108751.5-201ENST00000492880 1336 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 Y_RNA.65-201ENST00000362846 100 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RNU6-398P-201ENST00000384143 109 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL161787.1-201ENST00000401543 174 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL136131.1-201ENST00000406079 803 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RN7SKP251-201ENST00000410830 314 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RPSAP65-201ENST00000429660 595 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RPS24P8-201ENST00000431490 402 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL359265.2-201ENST00000434367 631 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL604028.2-201ENST00000437848 788 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RPL21P133-201ENST00000443666 476 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC007000.1-201ENST00000453064 794 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 MTCO3P8-201ENST00000453691 755 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SNORD5.1-201ENST00000458800 75 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC079804.1-201ENST00000461922 436 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RPL7P49-201ENST00000471402 708 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC044810.1-201ENST00000480271 711 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 RN7SKP82-201ENST00000516786 223 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 OR52K3P-201ENST00000531655 943 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SULT1C2P1-202ENST00000562418 459 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SUB1P3-201ENST00000564581 315 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 MIR5192-201ENST00000579892 92 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC007448.1-201ENST00000582714 234 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC012510.1-201ENST00000607946 759 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 FKBP1AP4-201ENST00000631775 336 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 OR5M2P-202ENST00000641241 4242 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 OR7E25P-202ENST00000641088 5937 ntBASIC7.63□□□□□ -1.19
LHX6Q9UPM6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LHX6Q9UPM6 AL022323.2-201ENST00000623239 3000 ntBASIC7.62□□□□□ -1.19
LHX6Q9UPM6 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.62□□□□□ -1.19
LHX6Q9UPM6 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms