Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SIX4Q9UIU6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SIX4Q9UIU6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIX4Q9UIU6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIX4Q9UIU6 AL138820.1-201ENST00000617901 5305 ntBASIC5.21□□□□□ -1.57
SIX4Q9UIU6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SIX4Q9UIU6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SIX4Q9UIU6 SMG1P6-201ENST00000532337 2930 ntBASIC5.21□□□□□ -1.57
SIX4Q9UIU6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
SIX4Q9UIU6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SIX4Q9UIU6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 OR4K17-201ENST00000315543 1032 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 SNORA72.3-201ENST00000365074 132 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 GAPDHP15-201ENST00000398586 975 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL035405.1-201ENST00000400795 710 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 RN7SKP100-201ENST00000411258 284 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 RSU1P3-201ENST00000412878 835 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL049745.1-201ENST00000433953 286 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 ELOCP3-201ENST00000439303 348 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL645638.1-201ENST00000440519 361 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC007000.2-201ENST00000442564 487 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 RPL36AP15-201ENST00000444514 266 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 RPL31P20-201ENST00000449593 360 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC022336.1-201ENST00000475510 337 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 RPL23AP73-201ENST00000492507 471 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL049830.4-201ENST00000555149 351 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC023158.1-201ENST00000561632 1025 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL158211.1-201ENST00000566763 763 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 MIR3667-201ENST00000581025 74 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC022726.1-201ENST00000587475 207 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL121932.1-201ENST00000605542 214 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC097504.2-201ENST00000608088 454 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 BX323046.1-201ENST00000610145 535 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 CR589904.2-201ENST00000612533 440 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC016597.2-201ENST00000613256 341 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AL138955.1-201ENST00000622881 1040 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC097460.3-201ENST00000623099 442 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC093849.1-201ENST00000563631 2209 ntBASIC5.21□□□□□ -1.58
SIX4Q9UIU6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX4Q9UIU6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 NCLP2-201ENST00000416078 1462 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC009501.3-201ENST00000605001 1352 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 MIR365B-201ENST00000362317 111 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AL353692.2-201ENST00000407054 335 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC114755.2-201ENST00000413520 361 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 RAB9AP4-201ENST00000415230 609 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 MTND4P11-201ENST00000417020 1058 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 UBE2D3P3-201ENST00000426992 425 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ARL5AP3-201ENST00000439327 386 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 Z99127.2-201ENST00000441426 334 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC073648.4-201ENST00000442655 781 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 Z80107.2-201ENST00000445127 392 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 HMGN1P5-201ENST00000448591 263 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 SCARNA22-201ENST00000503991 125 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 FABP5P6-201ENST00000510588 409 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 HMGB1P47-201ENST00000511281 589 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ENPP7P9-201ENST00000514456 627 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC112198.4-201ENST00000515450 351 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AP001880.2-201ENST00000538233 448 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms