Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AC015967.1-201ENST00000619893 476 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AC015804.1-201ENST00000622935 435 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AC005858.4-201ENST00000623191 700 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AL935212.3-201ENST00000450729 284 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AC005868.1-201ENST00000536421 331 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 MIR6500-201ENST00000622700 86 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 SYF2P2-201ENST00000417620 583 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 RPL7P2-201ENST00000427639 268 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC091286.1-201ENST00000431233 461 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC105233.3-201ENST00000531125 744 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC087477.6-201ENST00000559595 843 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 CR392039.5-201ENST00000623201 510 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 AC007342.8-201ENST00000623278 678 ntBASIC4.59□□□□□ -1.68
CHD7Q9P2D1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHD7Q9P2D1 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 LRRC37A9P-201ENST00000603850 5376 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 ATP5F1P4-201ENST00000397288 746 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 SNORA5A-201ENST00000384111 134 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 TPT1P2-201ENST00000413105 503 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 PPIAP13-201ENST00000434706 478 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 RNU6-352P-201ENST00000516908 107 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC093014.1-201ENST00000548926 724 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD7Q9P2D1 NBPF8-201ENST00000583271 5330 ntBASIC4.58□□□□□ -1.68
CHD7Q9P2D1 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 MIR218-2-201ENST00000385006 110 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 RPL21P17-201ENST00000397467 475 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 RPS4XP15-201ENST00000489210 795 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AC105031.1-201ENST00000518550 476 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AC096553.1-201ENST00000605169 829 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AL442067.2-201ENST00000614033 363 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 MIR491-201ENST00000384877 84 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 RHEBP2-201ENST00000450289 600 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 EIF2S2P5-201ENST00000457635 968 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 SRGNP1-201ENST00000603392 451 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 AC012314.7-201ENST00000619693 93 ntBASIC4.57□□□□□ -1.68
CHD7Q9P2D1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
CHD7Q9P2D1 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHD7Q9P2D1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD7Q9P2D1 CKS1BP6-201ENST00000424932 240 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 AL691449.1-201ENST00000426570 421 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.56□□□□□ -1.68
CHD7Q9P2D1 CYCSP32-201ENST00000440548 321 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 AL512326.1-201ENST00000443050 721 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 RPS20P21-201ENST00000466859 343 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.56□□□□□ -1.68
CHD7Q9P2D1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.56□□□□□ -1.68
CHD7Q9P2D1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.56□□□□□ -1.68
CHD7Q9P2D1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms