Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 MRPS6P2-201ENST00000381143 370 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 RNU6-1009P-201ENST00000390996 107 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 RNU6-1300P-201ENST00000391046 108 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 RPL23AP29-201ENST00000397284 453 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 RPSAP44-201ENST00000406712 884 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL389915.1-201ENST00000422463 466 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL354707.3-201ENST00000427308 331 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC073464.1-201ENST00000429823 534 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 FMO7P-201ENST00000436045 768 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 PDSS1P2-201ENST00000449397 678 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 RBM43P1-201ENST00000476891 1081 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC108078.1-201ENST00000508073 725 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 MTND3P22-201ENST00000510932 243 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC136618.2-201ENST00000575091 400 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC012146.2-201ENST00000576545 416 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 UBE2V2P2-201ENST00000587677 504 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 NPIPB1P-202ENST00000588786 828 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 AC019257.2-201ENST00000605539 497 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 AL353726.1-201ENST00000614041 1000 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SSU72Q9NP77 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSU72Q9NP77 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 MAPK10-261ENST00000641050 3109 ntBASIC6.32□□□□□ -1.4
SSU72Q9NP77 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 RNU6-839P-201ENST00000363347 108 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 RNU6-1090P-201ENST00000364065 94 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 RNU5E-5P-201ENST00000365379 116 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 SOD1P1-201ENST00000407803 440 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 USP9YP13-201ENST00000417797 480 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC069157.1-201ENST00000421749 137 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 RPS21P1-201ENST00000434479 247 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 CLUHP1-201ENST00000435012 1190 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 MTND5P14-201ENST00000441481 1267 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC093166.3-201ENST00000448785 303 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL033528.1-201ENST00000453780 140 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 VPS25P1-201ENST00000455691 508 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC112206.1-201ENST00000468416 477 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 RPL7AP30-201ENST00000482859 796 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC108078.3-201ENST00000502633 489 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC087360.1-201ENST00000518788 616 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 OR5M7P-201ENST00000526140 972 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 MIR4800-201ENST00000537353 80 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 NPM1P42-201ENST00000560329 862 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms