Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 HSPD1P14-201ENST00000432666 1618 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 ZNF849P-201ENST00000594711 1566 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ENSAP3-201ENST00000312710 333 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 SNORA72.3-201ENST00000365074 132 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC007618.1-201ENST00000366455 732 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 MIR589-201ENST00000385238 99 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RNA5SP296-201ENST00000410523 111 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 Z68694.1-201ENST00000413929 841 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AL353597.2-202ENST00000434901 373 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC012075.1-201ENST00000436549 580 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC092170.1-201ENST00000440211 356 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AL645638.1-201ENST00000440519 361 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 NOP56P2-201ENST00000447491 769 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 BX842559.2-201ENST00000451418 605 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RN7SL466P-201ENST00000497546 295 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC008427.1-201ENST00000503102 655 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC006427.1-201ENST00000514359 712 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RNA5SP228-201ENST00000516232 133 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC027544.3-201ENST00000535082 757 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC023825.1-201ENST00000566704 1030 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC095057.3-201ENST00000567102 1157 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC022884.2-201ENST00000578535 580 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 RN7SL708P-201ENST00000580952 299 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC011626.1-201ENST00000604710 562 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC112503.1-201ENST00000608436 391 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC126175.1-201ENST00000617041 758 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
BRF2Q9HAW0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF2Q9HAW0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RNU5B-4P-201ENST00000363508 111 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RPL21P67-201ENST00000402896 478 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RNA5SP178-201ENST00000410380 128 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC096533.1-201ENST00000411645 353 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC092745.2-202ENST00000411880 369 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RPL12P9-201ENST00000412942 488 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC009965.2-201ENST00000425328 970 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 PPIAP13-201ENST00000434706 478 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 CLUHP1-201ENST00000435012 1190 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RPS7P2-201ENST00000435134 607 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC068135.1-201ENST00000446164 246 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AL133445.1-201ENST00000467051 452 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RN7SL189P-201ENST00000468631 289 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RPL35AP19-201ENST00000469425 329 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 HPRT1P2-201ENST00000505250 544 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 SUMO2P5-201ENST00000506790 245 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms