Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 ELOCP23-201ENST00000452014 332 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 RPS27AP3-201ENST00000453803 454 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AL133351.3-201ENST00000454998 193 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 SNRPCP3-201ENST00000474888 476 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC114728.1-201ENST00000488289 483 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 RPL37P23-201ENST00000492641 294 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 FCF1P3-201ENST00000496394 590 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC018797.1-201ENST00000510791 255 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC116347.2-201ENST00000514912 523 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-528P-201ENST00000516926 100 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 OR6C7P-201ENST00000547875 934 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC009063.1-201ENST00000563342 702 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC027229.1-201ENST00000583887 253 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 NPIPB1P-202ENST00000588786 828 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AL137072.1-201ENST00000603444 466 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC009220.3-201ENST00000604318 586 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AP003117.2-201ENST00000606010 545 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC138932.5-201ENST00000617759 563 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC092794.2-201ENST00000620933 563 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 MIR6806-201ENST00000622141 64 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 RPL23AP61-201ENST00000623642 466 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC025048.6-202ENST00000627667 438 ntBASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.51□□□□□ -1.53
SEC61A2Q9H9S3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC232271.1-201ENST00000602455 2715 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC123769.1-201ENST00000530992 3192 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 Y_RNA.18-201ENST00000362461 102 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC099535.1-201ENST00000408928 371 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RN7SKP121-201ENST00000410842 305 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RPS26P38-201ENST00000414476 348 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RPS7P14-201ENST00000426405 583 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ISCA1P1-201ENST00000426679 387 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 NANOGP4-201ENST00000427230 913 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 HMGB1P45-201ENST00000435986 653 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 PPIAP10-201ENST00000438675 458 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC002542.1-201ENST00000440683 193 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC007383.1-201ENST00000445875 636 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 COX6CP12-201ENST00000446748 202 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 HMGB1P16-201ENST00000447155 540 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 SEPT7P3-201ENST00000455017 621 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 DNAJC19P1-201ENST00000455312 319 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 CTSLP6-201ENST00000458273 1002 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RPL12P31-201ENST00000478433 450 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 OR4D12P-201ENST00000509361 911 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RN7SKP244-201ENST00000516513 307 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms