Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 BX005019.1-201ENST00000561881 1810 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC126323.6-202ENST00000568092 3511 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC007342.7-201ENST00000624610 2337 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 RNA5SP507-201ENST00000363603 121 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 RNU4-34P-201ENST00000410431 124 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC114755.2-201ENST00000413520 361 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 CHEK2P3-201ENST00000416118 248 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 LINC00993-201ENST00000420453 540 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 OR6K4P-201ENST00000423179 955 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 CACYBPP1-201ENST00000438592 684 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AL356390.1-201ENST00000455684 397 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AL445433.1-201ENST00000457507 257 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 BTG4P1-201ENST00000510421 183 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 SEC11B-201ENST00000518383 499 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 IGHV3-63-201ENST00000518422 341 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 HMGN2P6-201ENST00000551091 273 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC009303.3-201ENST00000591103 736 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC084373.1-201ENST00000603311 235 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC020910.3-201ENST00000603701 874 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC097505.1-201ENST00000610199 565 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC015908.5-201ENST00000623289 343 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC091905.4-201ENST00000623432 202 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC112694.2-201ENST00000623697 768 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 TLK1P1-201ENST00000456760 2440 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 AC083843.3-201ENST00000623679 2186 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 CR788268.1-201ENST00000603931 1809 ntBASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.88□□□□□ -1.63
LRRC40Q9H9A6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 SNORD65-201ENST00000391079 73 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC007064.3-201ENST00000422608 359 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 RPS26P2-201ENST00000440331 348 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 TRY2P-201ENST00000448860 689 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 BUD31P2-201ENST00000449374 300 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC234781.3-201ENST00000452540 973 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 HMGN1P8-201ENST00000463578 288 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC004815.1-201ENST00000484185 331 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC147055.3-201ENST00000510547 851 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 BUD31P1-201ENST00000521828 359 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC087763.1-201ENST00000603391 286 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC007497.1-201ENST00000610421 561 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC015804.1-201ENST00000622935 435 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AL133268.1-201ENST00000405676 1401 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 AL445487.1-201ENST00000415694 1580 ntBASIC4.87□□□□□ -1.63
LRRC40Q9H9A6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC139713.2-215ENST00000641428 5037 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 RNU1-83P-201ENST00000363426 164 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 RPL23AP27-201ENST00000415161 451 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC099336.2-201ENST00000422457 254 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC092447.2-201ENST00000435487 669 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 CEACAMP7-201ENST00000444105 496 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC112498.1-201ENST00000444401 332 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 CLIC4P1-201ENST00000453177 535 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AL354710.1-201ENST00000453641 246 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 OR2AF1P-201ENST00000454899 889 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC099560.2-201ENST00000457554 255 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms