Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 MIR670-201ENST00000390142 98 ntBASIC6.94□□□□□ -1.3
SCAPERQ9BY12 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 AP003497.2-201ENST00000624220 967 ntBASIC6.94□□□□□ -1.3
SCAPERQ9BY12 AC090506.2-201ENST00000624521 419 ntBASIC6.94□□□□□ -1.3
SCAPERQ9BY12 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 AL031119.1-201ENST00000404707 1879 ntBASIC6.94□□□□□ -1.3
SCAPERQ9BY12 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.94□□□□□ -1.3
SCAPERQ9BY12 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AC008033.1-201ENST00000216407 1162 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 OR5P1P-201ENST00000299512 925 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 YY1P1-201ENST00000427625 668 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AGGF1P9-201ENST00000561884 913 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AC010503.3-201ENST00000594355 540 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AP001029.2-203ENST00000589795 4910 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 MAPK10-328ENST00000641553 4009 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AL450345.1-202ENST00000605741 3881 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AL121950.1-201ENST00000624993 2077 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 MIR208A-201ENST00000362287 71 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 DHFRP3-201ENST00000455595 559 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AC053481.1-201ENST00000467217 306 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AL049874.2-201ENST00000492636 288 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AC023632.4-201ENST00000517783 191 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.93□□□□□ -1.3
SCAPERQ9BY12 AL139254.3-201ENST00000641097 674 ntBASIC6.93□□□□□ -1.3
SCAPERQ9BY12 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 AC090220.1-201ENST00000593078 1699 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 RNA5SP283-201ENST00000365604 119 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 RPL17P50-201ENST00000396131 546 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 RPS27AP11-201ENST00000402798 447 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 E2F6P2-201ENST00000420708 748 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 AC020634.1-201ENST00000608701 549 ntBASIC6.92□□□□□ -1.3
SCAPERQ9BY12 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SCAPERQ9BY12 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AL356863.1-201ENST00000623378 1080 ntBASIC6.91□□□□□ -1.3
SCAPERQ9BY12 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCAPERQ9BY12 AC022417.1-201ENST00000624768 1303 ntBASIC6.91□□□□□ -1.3
SCAPERQ9BY12 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCAPERQ9BY12 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCAPERQ9BY12 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.9□□□□□ -1.3
SCAPERQ9BY12 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SCAPERQ9BY12 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCAPERQ9BY12 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.9□□□□□ -1.31
SCAPERQ9BY12 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 RPL21P67-201ENST00000402896 478 ntBASIC6.9□□□□□ -1.31
SCAPERQ9BY12 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.9□□□□□ -1.31
SCAPERQ9BY12 AL358232.1-201ENST00000448030 501 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms