Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC080078.2-201ENST00000603766 501 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC012414.7-202ENST00000622705 1090 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC073488.9-201ENST00000631601 754 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC008957.3-201ENST00000624112 2242 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 SMG1P5-202ENST00000529428 4219 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 SMG1P2-201ENST00000566127 4221 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 OR4G11P-202ENST00000642116 1414 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC117529.2-201ENST00000512159 2068 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC112243.1-201ENST00000623949 3851 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC093278.2-201ENST00000564956 2485 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 RNU1-65P-201ENST00000363919 148 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 RNU4-75P-201ENST00000364621 146 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 RNA5SP485-201ENST00000365053 119 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC025750.1-201ENST00000399891 379 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 MIR320C1-201ENST00000408566 88 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 RPS3AP9-201ENST00000417027 792 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AL139158.1-201ENST00000424719 340 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC092641.1-201ENST00000440229 772 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 ST13P20-201ENST00000447996 1065 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 PAXBP1P1-201ENST00000449315 447 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 SUMO2P2-201ENST00000456482 255 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC099521.1-201ENST00000482557 334 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC005726.1-201ENST00000494679 427 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 CBX3P3-201ENST00000508108 532 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 CYCSP28-201ENST00000534284 321 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AL162632.2-201ENST00000553933 399 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 GTF2IP22-201ENST00000554443 182 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC011921.2-201ENST00000589465 152 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC083760.1-201ENST00000589621 670 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC093765.1-201ENST00000603758 881 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC018692.2-201ENST00000624130 348 ntBASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TRAIPQ9BWF2 AC062029.1-202ENST00000606164 3651 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MTND5P28-201ENST00000438005 1594 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms