Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 RN7SL172P-201ENST00000460535 303 ntBASIC5.64□□□□□ -1.51
SMOQ99835 HIGD1AP14-201ENST00000507617 282 ntBASIC5.64□□□□□ -1.51
SMOQ99835 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 AC006518.2-201ENST00000542513 940 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AL442163.2-201ENST00000553912 710 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.64□□□□□ -1.51
SMOQ99835 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.64□□□□□ -1.51
SMOQ99835 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 OR7E18P-201ENST00000592589 702 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AC108738.1-201ENST00000603703 237 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.64□□□□□ -1.51
SMOQ99835 MIR6133-201ENST00000617057 108 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AC073569.3-201ENST00000619055 682 ntBASIC5.64□□□□□ -1.51
SMOQ99835 uc_338.7-201ENST00000621834 124 ntBASIC5.64□□□□□ -1.51
SMOQ99835 AC011815.3-201ENST00000624194 473 ntBASIC5.64□□□□□ -1.51
SMOQ99835 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.64□□□□□ -1.51
SMOQ99835 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.64□□□□□ -1.51
SMOQ99835 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.64□□□□□ -1.51
SMOQ99835 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMOQ99835 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.64□□□□□ -1.51
SMOQ99835 AC120338.1-201ENST00000625074 1541 ntBASIC5.64□□□□□ -1.51
SMOQ99835 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 AC011493.1-201ENST00000596753 1632 ntBASIC5.63□□□□□ -1.51
SMOQ99835 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 U3.7-201ENST00000363668 216 ntBASIC5.63□□□□□ -1.51
SMOQ99835 RNU4-92P-201ENST00000363783 136 ntBASIC5.63□□□□□ -1.51
SMOQ99835 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SMOQ99835 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
SMOQ99835 AL008987.1-201ENST00000415528 237 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AL356320.2-201ENST00000417263 507 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 C1DP1-201ENST00000426049 402 ntBASIC5.63□□□□□ -1.51
SMOQ99835 HSPE1P16-201ENST00000426640 348 ntBASIC5.63□□□□□ -1.51
SMOQ99835 UBE2V1P1-201ENST00000430836 445 ntBASIC5.63□□□□□ -1.51
SMOQ99835 VN1R108P-201ENST00000431580 830 ntBASIC5.63□□□□□ -1.51
SMOQ99835 MTND4P32-201ENST00000437189 1237 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC068135.1-201ENST00000446164 246 ntBASIC5.63□□□□□ -1.51
SMOQ99835 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 USP9YP25-201ENST00000457708 443 ntBASIC5.63□□□□□ -1.51
SMOQ99835 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 RN7SL222P-201ENST00000476452 299 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC079841.1-201ENST00000481228 950 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC023050.1-201ENST00000498198 304 ntBASIC5.63□□□□□ -1.51
SMOQ99835 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.63□□□□□ -1.51
SMOQ99835 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 AC108120.2-201ENST00000512973 294 ntBASIC5.63□□□□□ -1.51
SMOQ99835 SEPT10P1-201ENST00000517342 1162 ntBASIC5.63□□□□□ -1.51
SMOQ99835 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 AC004825.1-201ENST00000555068 586 ntBASIC5.63□□□□□ -1.51
SMOQ99835 OR11J2P-201ENST00000555298 907 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.63□□□□□ -1.51
SMOQ99835 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 AC124856.1-201ENST00000600819 896 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 RNU6-84P-201ENST00000607737 102 ntBASIC5.63□□□□□ -1.51
SMOQ99835 OR2BH1P-201ENST00000608850 864 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AL352984.2-202ENST00000613699 155 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AC010435.1-201ENST00000623353 1177 ntBASIC5.63□□□□□ -1.51
SMOQ99835 AP003400.3-201ENST00000624904 346 ntBASIC5.63□□□□□ -1.51
SMOQ99835 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.63□□□□□ -1.51
SMOQ99835 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 AC099654.6-201ENST00000636487 512 ntBASIC5.63□□□□□ -1.51
SMOQ99835 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 AC074101.1-201ENST00000637861 241 ntBASIC5.63□□□□□ -1.51
SMOQ99835 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.63□□□□□ -1.51
SMOQ99835 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 VN2R3P-201ENST00000422626 1412 ntBASIC5.63□□□□□ -1.51
SMOQ99835 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SMOQ99835 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMOQ99835 C4BPAP1-201ENST00000415474 1893 ntBASIC5.62□□□□□ -1.51
SMOQ99835 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 SPATA2P1-201ENST00000431223 2055 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms