Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 MUC2-202ENST00000613187 4845 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 LINC01963-201ENST00000562038 3148 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 RNA5SP394-201ENST00000364216 119 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 RNU6-1242P-201ENST00000391052 103 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 MTND4P13-201ENST00000402078 1023 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 RN7SKP229-201ENST00000410465 302 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 UBE2V1P11-201ENST00000411559 285 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC079355.1-201ENST00000421770 223 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC127526.2-201ENST00000426436 775 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 FO393419.3-201ENST00000428741 282 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 ETF1P3-201ENST00000430422 1160 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 RPS12P17-201ENST00000438591 377 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 CR769776.1-201ENST00000441254 787 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC005297.1-201ENST00000444765 862 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 NAP1L1P3-201ENST00000462291 880 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 RPL6P9-201ENST00000466502 859 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC093890.1-201ENST00000502554 540 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC074087.1-201ENST00000512059 724 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC108120.2-201ENST00000512973 294 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC021678.3-201ENST00000517893 476 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 IGLV2-28-201ENST00000520681 304 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 UBTFL10-201ENST00000528532 562 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC011611.5-201ENST00000552477 578 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC023824.3-201ENST00000569003 562 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC233702.9-201ENST00000581528 203 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 NIFKP6-201ENST00000598115 845 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC024060.1-201ENST00000607052 494 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC010435.1-201ENST00000623353 1177 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 AC004777.1-201ENST00000624317 287 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 FRG1EP-201ENST00000634469 770 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VPS50Q96JG6 MFSD8-219ENST00000641228 2559 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS50Q96JG6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.41□□□□□ -1.54
VPS50Q96JG6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 VN2R3P-201ENST00000422626 1412 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC099786.3-201ENST00000565735 1410 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 NXF4-202ENST00000416098 1465 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 RNU6-932P-201ENST00000391108 106 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC009784.1-201ENST00000426484 460 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 MTCYBP31-201ENST00000438855 1122 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 HSFY3P-201ENST00000444242 1191 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 ZNF886P-201ENST00000450781 723 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms