Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 RANP1-206ENST00000455094 651 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 RN7SL51P-201ENST00000468230 285 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 AC078857.1-201ENST00000469870 667 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 RPL7P40-201ENST00000481703 745 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 RNU6-941P-201ENST00000516346 108 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 HMGB1P19-201ENST00000517578 577 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 AC025260.1-201ENST00000548858 430 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 POLR2KP1-201ENST00000553226 168 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 MIR4505-201ENST00000582238 73 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.94□□□□□ -1.62
VPS33AQ96AX1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS33AQ96AX1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 RNA5SP319-201ENST00000362768 119 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 RNA5SP335-201ENST00000363817 110 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AL034370.1-201ENST00000397254 1590 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 VN1R12P-201ENST00000403778 876 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AL512430.2-201ENST00000406786 339 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 VTA1P1-201ENST00000414044 866 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC019050.1-201ENST00000418508 492 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 OR2AH1P-201ENST00000425717 928 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 KCTD9P1-201ENST00000430462 1167 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 RPL7P29-201ENST00000437151 728 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 RPL36AP39-201ENST00000445859 318 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 MTND2P8-201ENST00000450555 1025 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 RN7SL515P-201ENST00000463999 297 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC005412.2-201ENST00000492004 341 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 HMGB3P16-201ENST00000508037 287 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC074087.1-201ENST00000512059 724 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 HMGB1P40-201ENST00000525121 540 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 MTND4LP25-201ENST00000570218 163 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC090948.2-201ENST00000607363 564 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC015871.5-202ENST00000623252 701 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 ASNSP1-201ENST00000518311 1939 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 AC235565.1-201ENST00000456962 1325 ntBASIC4.93□□□□□ -1.62
VPS33AQ96AX1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS33AQ96AX1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC120338.1-201ENST00000625074 1541 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC126323.6-202ENST00000568092 3511 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms