Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC015912.2-201ENST00000571053 181 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 AL451086.1-201ENST00000605596 223 ntBASIC7.49□□□□□ -1.21
TOPBP1Q92547 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOPBP1Q92547 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOPBP1Q92547 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOPBP1Q92547 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.49□□□□□ -1.21
TOPBP1Q92547 AC008549.2-201ENST00000333482 706 ntBASIC7.48□□□□□ -1.21
TOPBP1Q92547 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.48□□□□□ -1.21
TOPBP1Q92547 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TOPBP1Q92547 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOPBP1Q92547 MIR449B-201ENST00000384995 97 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC091564.1-201ENST00000464563 479 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC105233.3-201ENST00000531125 744 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOPBP1Q92547 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 ZNF812P-201ENST00000457674 1694 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOPBP1Q92547 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AL035696.2-201ENST00000407941 709 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC013429.2-201ENST00000418798 781 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AC105031.1-201ENST00000518550 476 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 OR8G7P-201ENST00000616658 848 ntBASIC7.47□□□□□ -1.21
TOPBP1Q92547 TEX41-300ENST00000631048 69 ntTSL 5 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.47□□□□□ -1.21
TOPBP1Q92547 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
TOPBP1Q92547 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
TOPBP1Q92547 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.46□□□□□ -1.21
TOPBP1Q92547 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TOPBP1Q92547 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.46□□□□□ -1.22
TOPBP1Q92547 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.46□□□□□ -1.22
TOPBP1Q92547 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
TOPBP1Q92547 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 RLIMP1-201ENST00000339626 1680 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.46□□□□□ -1.22
TOPBP1Q92547 AL157831.1-201ENST00000426134 473 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 RPL7P2-201ENST00000427639 268 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 RPS20P4-201ENST00000461659 355 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 MIR3944-201ENST00000581277 108 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 AC017100.2-201ENST00000584628 355 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 BPIFA4P-203ENST00000603168 689 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 AC023762.1-201ENST00000603280 584 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 FAM27D1-201ENST00000612308 341 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 AC007546.1-201ENST00000619452 559 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOPBP1Q92547 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.46□□□□□ -1.22
TOPBP1Q92547 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.46□□□□□ -1.22
TOPBP1Q92547 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.45□□□□□ -1.22
TOPBP1Q92547 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 ST7-221ENST00000465133 2155 ntTSL 5 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 RNA5SP372-201ENST00000390836 115 ntBASIC7.45□□□□□ -1.22
TOPBP1Q92547 CRYBB2P1-203ENST00000415709 538 ntBASIC7.45□□□□□ -1.22
TOPBP1Q92547 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 COX6B1P7-201ENST00000430845 235 ntBASIC7.45□□□□□ -1.22
TOPBP1Q92547 ARL4AP4-201ENST00000434170 518 ntBASIC7.45□□□□□ -1.22
TOPBP1Q92547 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms