Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 DHX9P1-201ENST00000436565 3076 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 PANDAR-201ENST00000629595 1506 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 MAPK10-349ENST00000641767 3661 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 SNORA73.1-201ENST00000363107 205 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 BMS1P3-201ENST00000372011 932 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 MIR600-201ENST00000385007 98 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 ATP5HP3-201ENST00000396994 486 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 TAF9BP2-201ENST00000400856 499 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 MIR1178-201ENST00000408396 91 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 NPM1P4-201ENST00000414095 812 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RPS26P13-201ENST00000419030 330 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 SLC35E1P1-201ENST00000419313 864 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 EIF4A1P1-201ENST00000420241 934 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 NPM1P33-201ENST00000438918 872 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC073052.1-201ENST00000440417 714 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RPL23AP23-201ENST00000452590 471 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AL445433.1-201ENST00000457507 257 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 ATP5G1P3-201ENST00000463301 410 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC092905.1-201ENST00000467527 949 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC112206.1-201ENST00000468416 477 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC012339.2-201ENST00000523996 453 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC084759.1-201ENST00000561168 290 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC007448.1-201ENST00000582714 234 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 RNF138P2-201ENST00000603490 592 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC104687.2-201ENST00000604442 342 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AP001033.2-201ENST00000609701 1003 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 MIR8084-201ENST00000614105 89 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC090772.4-201ENST00000623599 362 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 FRG1DP-201ENST00000635586 771 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A1Q8WWI5 AC133552.1-201ENST00000569988 4007 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 AC097461.1-201ENST00000568928 2821 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 CR788268.1-201ENST00000603931 1809 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 ZNF90P1-201ENST00000480493 1951 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 AC008549.2-201ENST00000333482 706 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-925P-201ENST00000384629 104 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-1320P-201ENST00000390838 107 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-1269P-201ENST00000391139 107 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RN7SKP247-201ENST00000411094 308 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RPL26P37-201ENST00000411983 438 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 AL606495.1-201ENST00000422100 813 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 CFL1P1-202ENST00000432948 411 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 PTP4A1P3-201ENST00000433661 420 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
SLC44A1Q8WWI5 RNU6-599P-201ENST00000459383 107 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms