Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RBPJP2-201ENST00000618187 1444 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 ZNF29P-201ENST00000225587 168 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 SNORA51.8-201ENST00000384234 132 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 RNU11-201ENST00000387069 134 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 SNORD65C-201ENST00000390962 71 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL049745.1-201ENST00000433953 286 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC092647.2-201ENST00000452998 253 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL035407.2-201ENST00000454090 378 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 RPS3AP41-201ENST00000462701 778 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 RN7SL860P-201ENST00000473738 223 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 PDCL3P4-201ENST00000489621 720 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 OR8G5-201ENST00000524943 1041 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC025260.1-201ENST00000548858 430 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AGGF1P5-201ENST00000567900 919 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC011447.4-201ENST00000587562 111 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL360012.1-201ENST00000602813 131 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC112220.2-201ENST00000605513 533 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC093388.1-201ENST00000609166 430 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AL157392.4-201ENST00000609756 345 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC073869.7-201ENST00000640874 297 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AP001153.1-201ENST00000641024 338 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 AC093311.1-201ENST00000506586 2021 ntBASIC5.36□□□□□ -1.55
HMGB4Q8WW32 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB4Q8WW32 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 CASC19-260ENST00000641828 2001 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 MTCO1P7-201ENST00000419523 1542 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 CASC19-221ENST00000641309 1382 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 ANAPC10P1-201ENST00000395991 556 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC092638.1-201ENST00000411966 1275 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LIPT1P1-201ENST00000415870 1186 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 OR10T1P-201ENST00000424327 947 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC009784.1-201ENST00000426484 460 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC073648.4-201ENST00000442655 781 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AL035551.1-201ENST00000446931 348 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 OR51B8P-201ENST00000449892 769 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms