Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 METTL21EP-201ENST00000298105 713 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RNU6-543P-201ENST00000362576 108 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RNU6-433P-201ENST00000363216 104 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RNU1-65P-201ENST00000363919 148 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 PPIAP26-201ENST00000377951 522 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.489-201ENST00000384410 101 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC092642.1-201ENST00000392417 425 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 GSTA12P-201ENST00000402398 508 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RPL7P58-201ENST00000402913 758 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL049697.2-201ENST00000403708 294 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 HMGB3P2-201ENST00000411913 584 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL606753.1-201ENST00000427435 87 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RPS10P21-201ENST00000430654 475 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL590128.1-201ENST00000433407 286 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL392103.1-201ENST00000447000 198 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC002075.1-201ENST00000457396 676 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RN7SL216P-201ENST00000471607 298 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RPL12P20-201ENST00000475538 479 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 KLHL2P1-201ENST00000508691 521 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 SUMO2P7-201ENST00000511179 285 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RNU6-964P-201ENST00000516524 69 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 COPS8P3-201ENST00000526024 482 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC109635.4-202ENST00000531666 412 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC124068.1-201ENST00000563131 678 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 MIR3910-1-201ENST00000580936 111 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC012175.1-201ENST00000603755 531 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC112191.3-201ENST00000604371 277 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AL356585.4-201ENST00000623078 1229 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC061999.1-201ENST00000624454 177 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC011447.6-201ENST00000623510 2598 ntBASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 NF1P8-201ENST00000415351 1461 ntBASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 AP003119.3-201ENST00000566747 4192 ntBASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NPAS3Q8IXF0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RNU6-774P-201ENST00000363238 107 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RNU6-238P-201ENST00000363313 106 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RN7SKP44-201ENST00000363602 316 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RNA5SP27-201ENST00000363839 119 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RNU6-1322P-201ENST00000364309 107 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 UBBP1-201ENST00000392399 473 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 RNU6-1068P-201ENST00000410958 103 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 MRPL50P2-201ENST00000416821 482 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms