Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AL590762.2-201ENST00000395798 571 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 SNORA11.3-201ENST00000408471 128 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 OR3A2-201ENST00000408891 1076 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AC005033.1-201ENST00000428904 813 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AC093414.1-201ENST00000434712 514 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AL391987.1-201ENST00000441025 200 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AC012158.1-204ENST00000483430 465 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 MRPS33P2-201ENST00000507850 322 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 SNORA11.6-201ENST00000619030 128 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 AP002967.1-201ENST00000624203 539 ntBASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUDCD3Q8IVD9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 OR52B1P-201ENST00000316506 909 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MIR143-201ENST00000385300 106 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL589647.1-201ENST00000402485 466 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL512430.2-201ENST00000406786 339 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL139039.2-201ENST00000407436 479 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RPL21P43-201ENST00000425440 472 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL121776.1-201ENST00000429337 372 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RPL10P17-201ENST00000453852 316 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 SNRPCP2-201ENST00000504370 475 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RNA5SP446-201ENST00000515955 82 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RNA5SP228-201ENST00000516232 133 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RNA5SP360-201ENST00000516555 118 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 IGKV3D-34-201ENST00000522638 302 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC012146.2-201ENST00000576545 416 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MIR5699-201ENST00000578903 90 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MIR4691-201ENST00000583764 85 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC011445.2-201ENST00000599274 173 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 RPL7P50-201ENST00000600588 727 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC087283.1-201ENST00000604029 1074 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MEMO1P5-201ENST00000604810 406 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC023813.4-201ENST00000607580 580 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 CR381572.2-201ENST00000624852 397 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 ZNF733P-202ENST00000444809 1573 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AC017104.4-201ENST00000636283 1592 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 AL031119.1-201ENST00000404707 1879 ntBASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NUDCD3Q8IVD9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 OR14L1P-202ENST00000641545 3009 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms