Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NANOGP4-201ENST00000427230 913 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 RPL12P28-201ENST00000430852 489 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 RPL34P6-201ENST00000432390 345 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL161722.2-201ENST00000434731 981 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 Z92846.1-201ENST00000456203 268 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 RN7SL189P-201ENST00000468631 289 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 COPS8P2-201ENST00000473228 627 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 RPS4XP1-201ENST00000482189 787 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 NIFKP7-201ENST00000503365 834 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC079148.1-201ENST00000565944 819 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC018552.3-201ENST00000567416 561 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC010200.2-201ENST00000605098 235 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC022467.1-201ENST00000614738 749 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 RPSAP73-201ENST00000614820 330 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 AC114546.3-201ENST00000623582 1734 ntBASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NHLRC1Q6VVB1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AP001002.1-201ENST00000625148 1513 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 UBBP2-201ENST00000376781 231 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 MIR105-1-201ENST00000385222 81 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 RN7SKP59-201ENST00000410520 314 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 OR13Z1P-201ENST00000416141 834 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AL358176.3-201ENST00000420757 454 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC073069.1-201ENST00000428657 441 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC090018.1-201ENST00000434369 367 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 PPIAP13-201ENST00000434706 478 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC245047.2-201ENST00000441060 530 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC239809.1-201ENST00000450470 217 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 RPS4XP12-201ENST00000461747 709 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 RN7SL515P-201ENST00000463999 297 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 RFPL4AP5-201ENST00000514977 504 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC012400.1-201ENST00000518452 381 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC107918.3-201ENST00000533272 382 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC025260.1-201ENST00000548858 430 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AL049779.2-201ENST00000553847 315 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC095055.1-201ENST00000603472 1113 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC119501.1-201ENST00000603646 475 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC243654.2-201ENST00000612843 443 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 U6.48-201ENST00000618523 106 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC020923.1-201ENST00000624021 917 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms