Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC092490.3-201ENST00000545370 572 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC010487.1-201ENST00000594408 1172 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC087763.1-201ENST00000603391 286 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC008814.1-201ENST00000603797 406 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNU4-5P-201ENST00000607255 135 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC005021.1-201ENST00000608730 355 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 Z99129.2-201ENST00000619967 314 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AP002799.1-201ENST00000623552 423 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC093875.1-201ENST00000623688 504 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RNU5B-4P-201ENST00000363508 111 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RNU6-207P-201ENST00000384137 107 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AL356968.2-201ENST00000412769 1257 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC007394.1-201ENST00000421941 531 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 EI24P4-201ENST00000423683 1078 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 NANOGP5-201ENST00000424456 877 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 MTND2P5-201ENST00000432656 1006 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 FABP5P3-201ENST00000437960 408 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RPS29P10-201ENST00000439197 166 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 MTCO1P53-201ENST00000441633 699 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AL591719.1-201ENST00000444669 744 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC073850.1-201ENST00000449243 255 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RN7SL610P-201ENST00000463845 291 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC097484.1-201ENST00000471148 389 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC020779.1-201ENST00000478757 796 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 METTL15P1-201ENST00000481421 1045 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RPS12P31-201ENST00000491419 398 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC119751.5-201ENST00000514077 770 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AP002373.2-201ENST00000541631 1060 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC104229.1-201ENST00000561364 255 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AL445222.1-201ENST00000607259 628 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC006386.1-201ENST00000619436 415 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 AC138907.10-201ENST00000623708 983 ntBASIC5.52□□□□□ -1.53
VSTM1Q6UX27 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSTM1Q6UX27 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 OR9G4-201ENST00000302957 984 ntBASIC5.51□□□□□ -1.53
VSTM1Q6UX27 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSTM1Q6UX27 ZNF602P-201ENST00000405929 924 ntBASIC5.51□□□□□ -1.53
VSTM1Q6UX27 CTSL3P-202ENST00000412179 788 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms