Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC121758.1-202ENST00000556917 658 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC068768.2-201ENST00000602352 343 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC123786.2-201ENST00000603459 275 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AP004247.3-201ENST00000608682 624 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC092681.3-201ENST00000609463 678 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC073488.3-201ENST00000631611 778 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AL353743.4-201ENST00000422653 1547 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AP005901.5-201ENST00000545779 1796 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 RBPJP7-201ENST00000442803 1447 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 RBPJP5-201ENST00000449433 1447 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AP000756.2-201ENST00000624168 2567 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 HMGB1P5-201ENST00000255320 642 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 RNU6-619P-201ENST00000365146 108 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 TMSB4XP8-201ENST00000402089 135 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 RPL35AP3-201ENST00000414680 288 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 TMSB4XP6-201ENST00000415187 135 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC066692.1-201ENST00000421721 457 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 TMSB4XP1-201ENST00000424567 135 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC009965.2-201ENST00000425328 970 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC096775.1-201ENST00000437724 448 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC087672.1-201ENST00000479876 766 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 RPS27P23-201ENST00000487608 251 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC008629.2-201ENST00000503783 483 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC091951.3-201ENST00000504093 246 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 MRPS36P5-201ENST00000551909 298 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AADACP1-206ENST00000561502 1193 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC092332.1-201ENST00000563684 829 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 MIR5010-201ENST00000582846 120 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AL121890.2-201ENST00000617644 465 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 AC008627.1-201ENST00000517511 1704 ntBASIC5.45□□□□□ -1.54
RNF220Q5VTB9 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF220Q5VTB9 CASC19-204ENST00000641001 2055 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 SNRPEP6-201ENST00000407465 277 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL049737.1-201ENST00000413920 1403 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL008987.1-201ENST00000415528 237 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 RPS4XP5-201ENST00000419038 768 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL139158.1-201ENST00000424719 340 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL353662.1-201ENST00000439099 327 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 RPL5P7-201ENST00000444235 813 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms