Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC44A4Q53GD3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC005224.3-201ENST00000584683 2140 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 MFSD8-220ENST00000641243 1422 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 PCAT14-202ENST00000627127 3935 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AL034546.1-201ENST00000623740 3693 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC026523.2-201ENST00000625039 7739 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 MIR551A-201ENST00000385042 96 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 RPL5P19-201ENST00000404228 893 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 YWHAZP2-201ENST00000440317 728 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC092155.2-201ENST00000454675 477 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 RPS4XP12-201ENST00000461747 709 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC020898.1-201ENST00000474167 787 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 RN7SL447P-201ENST00000494711 245 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC026414.1-201ENST00000504046 698 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 ST13P12-201ENST00000508958 1094 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AP000676.2-201ENST00000529711 301 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 BLZF2P-201ENST00000553776 1130 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC007346.2-201ENST00000564816 892 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 OR1F2P-201ENST00000570470 933 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC027455.1-201ENST00000574104 594 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC008751.2-201ENST00000597885 980 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC013444.2-201ENST00000603317 787 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC005377.1-201ENST00000605126 456 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC100827.5-201ENST00000615883 426 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AL355493.4-201ENST00000618530 292 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC073569.3-201ENST00000619055 682 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 AC068620.4-201ENST00000636730 1182 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 NXF4-202ENST00000416098 1465 ntBASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC44A4Q53GD3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RPS27AP11-201ENST00000402798 447 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 HMGB3P31-201ENST00000413333 595 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 HIGD1AP15-201ENST00000416198 280 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RPS4XP16-201ENST00000427198 791 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 FAM96AP1-201ENST00000430879 482 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 CACYBPP1-201ENST00000438592 684 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AL591719.1-201ENST00000444669 744 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 Z83846.1-201ENST00000446798 265 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC021205.1-201ENST00000468797 348 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC023424.1-201ENST00000496058 459 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 SNRPCP2-201ENST00000504370 475 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RNA5SP228-201ENST00000516232 133 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 RNU6-1004P-201ENST00000516584 111 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms