Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC116562.1-201ENST00000485355 781 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 SNRPCP2-201ENST00000504370 475 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 AC091917.2-201ENST00000505002 744 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RFX4Q33E94 AF186190.1-201ENST00000517470 480 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.4□□□□□ -1.71
RFX4Q33E94 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX4Q33E94 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX4Q33E94 AC125612.1-201ENST00000547580 377 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.4□□□□□ -1.71
RFX4Q33E94 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
RFX4Q33E94 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX4Q33E94 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX4Q33E94 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 AC010424.2-201ENST00000607594 443 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX4Q33E94 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX4Q33E94 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX4Q33E94 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX4Q33E94 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RFX4Q33E94 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX4Q33E94 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX4Q33E94 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX4Q33E94 Z98755.1-201ENST00000407015 1384 ntBASIC4.4□□□□□ -1.71
RFX4Q33E94 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX4Q33E94 CUL4AP1-201ENST00000514750 1863 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC007382.1-201ENST00000624376 2618 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 TLK1P1-201ENST00000456760 2440 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 SNURFL-201ENST00000309296 343 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 SNORA70-201ENST00000384436 135 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 U3.36-201ENST00000408418 213 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX4Q33E94 MTND4LP21-201ENST00000415303 295 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AF186996.5-201ENST00000418098 904 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 RPS17P8-201ENST00000434525 335 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 FAR2P1-206ENST00000449736 709 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 MTCYBP14-201ENST00000457471 715 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AC006967.1-201ENST00000467608 589 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 COPS8P2-201ENST00000473228 627 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 RN7SL222P-201ENST00000476452 299 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AL133372.1-201ENST00000493565 745 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 TRAV11-201ENST00000539512 339 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 DYNLL1P4-201ENST00000549314 266 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC004825.1-201ENST00000555068 586 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AC007225.2-201ENST00000562529 256 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 SNX18P1Y-201ENST00000616231 511 ntBASIC4.39□□□□□ -1.71
RFX4Q33E94 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RFX4Q33E94 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RFX4Q33E94 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
RFX4Q33E94 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX4Q33E94 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX4Q33E94 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX4Q33E94 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX4Q33E94 ZFRP1-201ENST00000457579 2970 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 VN2R3P-201ENST00000422626 1412 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX4Q33E94 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
RFX4Q33E94 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFX4Q33E94 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.38□□□□□ -1.71
RFX4Q33E94 AL160275.2-201ENST00000412010 394 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AP000534.2-201ENST00000412729 568 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX4Q33E94 TBCAP2-201ENST00000416175 326 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 MTND6P18-201ENST00000439477 513 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX4Q33E94 PTMAP3-201ENST00000447474 330 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC016724.1-201ENST00000453215 421 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms