Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 SDHCP2-201ENST00000398565 501 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 EI24P3-201ENST00000399046 1062 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 TPT1P1-201ENST00000458495 518 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AC098799.3-201ENST00000506095 438 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 U3.53-201ENST00000628922 216 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 SALL4P2-201ENST00000423288 2910 ntBASIC5.6□□□□□ -1.51
RFX7Q2KHR2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX7Q2KHR2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 OR14L1P-202ENST00000641545 3009 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 MUC2-202ENST00000613187 4845 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 RNA5SP447-201ENST00000363749 119 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AC234779.1-201ENST00000425910 285 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 RPS26P2-201ENST00000440331 348 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 SCARNA10-201ENST00000459255 330 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 IGBP1P5-201ENST00000507524 1000 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 SNORD91B-202ENST00000608459 222 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 AC016717.3-201ENST00000624730 554 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 OR52H1-202ENST00000641796 1061 ntBASIC5.59□□□□□ -1.51
RFX7Q2KHR2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFX7Q2KHR2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RFX7Q2KHR2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
RFX7Q2KHR2 AP001642.1-201ENST00000624727 2117 ntBASIC5.59□□□□□ -1.52
RFX7Q2KHR2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.59□□□□□ -1.52
RFX7Q2KHR2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RFX7Q2KHR2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AC133552.1-201ENST00000569988 4007 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 SNORA71.2-201ENST00000364941 134 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AL049693.1-201ENST00000402760 611 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 NUTF2P7-201ENST00000453086 375 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 ISCUP1-201ENST00000454451 448 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AC084783.1-201ENST00000565846 910 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AC005191.1-201ENST00000603950 358 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 COX6CP4-201ENST00000605798 228 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 OR51C1P-201ENST00000608504 942 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 AC012409.3-201ENST00000611343 981 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 RAD17P1-201ENST00000418130 2042 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFX7Q2KHR2 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.58□□□□□ -1.52
RFX7Q2KHR2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AC021146.4-201ENST00000309229 279 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 OR56B2P-201ENST00000317102 954 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 Z98745.1-201ENST00000402553 494 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 RNA5SP103-201ENST00000459503 118 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 RPL23AP37-201ENST00000479658 549 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AC083829.1-201ENST00000503756 657 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 RNU6-513P-201ENST00000516104 104 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 RPL7P50-201ENST00000600588 727 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AL133338.2-201ENST00000604292 736 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AC005962.2-201ENST00000611427 652 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 AC107068.1-201ENST00000563286 4218 ntBASIC5.57□□□□□ -1.52
RFX7Q2KHR2 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFX7Q2KHR2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL136164.3-201ENST00000624429 3978 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms