Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 OR14L1P-202ENST00000641545 3009 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AC021146.4-201ENST00000309229 279 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 RNA5SP397-201ENST00000391323 118 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 CYB5AP4-201ENST00000396692 399 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AL590139.1-201ENST00000416267 400 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AC069213.2-201ENST00000420238 366 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXF1Q12946 AL513533.1-201ENST00000453728 415 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 ISCUP1-201ENST00000454451 448 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 SCARNA10-201ENST00000459255 330 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 RPL23AP37-201ENST00000479658 549 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.16□□□□□ -1.74
FOXF1Q12946 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 HMGB1P19-201ENST00000517578 577 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXF1Q12946 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXF1Q12946 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXF1Q12946 OR7M1P-201ENST00000608946 533 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 BX323046.1-201ENST00000610145 535 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 AC073342.3-201ENST00000624211 193 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXF1Q12946 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXF1Q12946 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXF1Q12946 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.16□□□□□ -1.74
FOXF1Q12946 CASC19-204ENST00000641001 2055 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
FOXF1Q12946 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
FOXF1Q12946 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
FOXF1Q12946 KARSP3-201ENST00000571212 1504 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
FOXF1Q12946 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXF1Q12946 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXF1Q12946 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXF1Q12946 OR1F12-201ENST00000402365 945 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 RPS16P5-201ENST00000406501 404 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AL445213.1-201ENST00000412589 747 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 RPS26P2-201ENST00000440331 348 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXF1Q12946 RPL23AP72-201ENST00000492447 435 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 AC093890.1-201ENST00000502554 540 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC137768.1-201ENST00000549998 553 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC005520.3-201ENST00000602874 370 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 MIR7703-201ENST00000620784 77 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 AC021106.3-201ENST00000623925 531 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXF1Q12946 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXF1Q12946 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
FOXF1Q12946 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC097461.1-201ENST00000568928 2821 ntBASIC4.15□□□□□ -1.75
FOXF1Q12946 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXF1Q12946 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXF1Q12946 UGT2B26P-201ENST00000508672 1613 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXF1Q12946 OR56B2P-201ENST00000317102 954 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AC079741.1-201ENST00000321498 212 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 RNA5SP505-201ENST00000364748 108 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 SNORA70F-201ENST00000384142 135 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 MIR659-201ENST00000384963 97 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXF1Q12946 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AC016769.2-201ENST00000414815 475 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXF1Q12946 RPS12P10-201ENST00000427031 377 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXF1Q12946 YWHAZP2-201ENST00000440317 728 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AC007686.1-201ENST00000488511 463 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AK4P6-201ENST00000505168 528 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AP001781.1-201ENST00000530977 207 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXF1Q12946 AC209154.1-201ENST00000582156 337 ntBASIC4.14□□□□□ -1.75
FOXF1Q12946 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXF1Q12946 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXF1Q12946 AC053481.2-202ENST00000582394 1500 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms