Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC005951.1-201ENST00000576706 485 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.89□□□□□ -1.63
LTBQ06643 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.89□□□□□ -1.63
LTBQ06643 QTRT1P1-201ENST00000604344 1078 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AP002802.2-201ENST00000605877 235 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC244107.2-201ENST00000611773 76 ntBASIC4.89□□□□□ -1.63
LTBQ06643 MIR378J-201ENST00000611988 109 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC231759.1-201ENST00000616455 597 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC021755.4-201ENST00000616620 456 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC139792.2-201ENST00000624218 587 ntBASIC4.89□□□□□ -1.63
LTBQ06643 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LTBQ06643 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.89□□□□□ -1.63
LTBQ06643 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 MIR365B-201ENST00000362317 111 ntBASIC4.88□□□□□ -1.63
LTBQ06643 U8.4-201ENST00000363626 134 ntBASIC4.88□□□□□ -1.63
LTBQ06643 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 DBIP1-201ENST00000401435 260 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.88□□□□□ -1.63
LTBQ06643 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 HMGN2P27-201ENST00000427352 270 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 RPL7L1P9-201ENST00000431298 745 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC091390.1-201ENST00000433904 331 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 OR10R1P-201ENST00000441524 1141 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC245517.2-201ENST00000442890 346 ntBASIC4.88□□□□□ -1.63
LTBQ06643 Z73417.1-201ENST00000447373 778 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC090804.1-201ENST00000448870 490 ntBASIC4.88□□□□□ -1.63
LTBQ06643 RANP1-206ENST00000455094 651 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC022336.1-201ENST00000475510 337 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC016687.1-201ENST00000482574 353 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC010374.1-201ENST00000503762 1237 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.88□□□□□ -1.63
LTBQ06643 MTND6P2-201ENST00000512226 524 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 AC020937.1-201ENST00000519677 1013 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AP004607.2-201ENST00000533949 322 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC008147.3-201ENST00000548666 354 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.88□□□□□ -1.63
LTBQ06643 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 MTCYBP28-201ENST00000566728 1132 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC015720.2-201ENST00000567709 334 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.88□□□□□ -1.63
LTBQ06643 PCNAP1-202ENST00000595299 752 ntBASIC4.88□□□□□ -1.63
LTBQ06643 SNX6P1-201ENST00000601728 1224 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC079880.2-201ENST00000603790 1213 ntBASIC4.88□□□□□ -1.63
LTBQ06643 SUGT1P3-202ENST00000604259 383 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AL022161.1-201ENST00000604390 213 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AL451086.1-201ENST00000605596 223 ntBASIC4.88□□□□□ -1.63
LTBQ06643 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.88□□□□□ -1.63
LTBQ06643 AC099654.6-201ENST00000636487 512 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 AC006927.2-201ENST00000639256 389 ntBASIC4.88□□□□□ -1.63
LTBQ06643 AL078621.3-201ENST00000623707 2042 ntBASIC4.88□□□□□ -1.63
LTBQ06643 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.88□□□□□ -1.63
LTBQ06643 MTND4P8-201ENST00000514997 1362 ntBASIC4.88□□□□□ -1.63
LTBQ06643 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.88□□□□□ -1.63
LTBQ06643 AL356317.1-201ENST00000396110 1436 ntBASIC4.88□□□□□ -1.63
LTBQ06643 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.88□□□□□ -1.63
LTBQ06643 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LTBQ06643 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LTBQ06643 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.87□□□□□ -1.63
LTBQ06643 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms