Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC013701.1-201ENST00000522657 465 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 AC022832.1-201ENST00000530718 645 ntBASIC3.11□□□□□ -1.91
RPL39P62891 UBTFL9-201ENST00000534504 1148 ntBASIC3.11□□□□□ -1.91
RPL39P62891 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.11□□□□□ -1.91
RPL39P62891 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 AC124068.1-201ENST00000563131 678 ntBASIC3.11□□□□□ -1.91
RPL39P62891 RPL23AP97-201ENST00000568955 471 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.11□□□□□ -1.91
RPL39P62891 OR1AB1P-201ENST00000585564 761 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 OR7A8P-201ENST00000595427 913 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC005034.4-201ENST00000603612 899 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC020634.1-201ENST00000608701 549 ntBASIC3.11□□□□□ -1.91
RPL39P62891 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
RPL39P62891 AC112255.1-201ENST00000624070 2493 ntBASIC3.1□□□□□ -1.91
RPL39P62891 CPHL1P-201ENST00000461341 3407 ntBASIC3.1□□□□□ -1.91
RPL39P62891 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 RNU4-44P-201ENST00000363050 141 ntBASIC3.1□□□□□ -1.91
RPL39P62891 SNORA71.2-201ENST00000364941 134 ntBASIC3.1□□□□□ -1.91
RPL39P62891 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.1□□□□□ -1.91
RPL39P62891 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 RN7SKP247-201ENST00000411094 308 ntBASIC3.1□□□□□ -1.91
RPL39P62891 RNA5SP39-201ENST00000411245 120 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 TRIM60P17-201ENST00000415181 719 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 CNOT7P2-201ENST00000441051 832 ntBASIC3.1□□□□□ -1.91
RPL39P62891 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.1□□□□□ -1.91
RPL39P62891 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 ABCF2P2-201ENST00000450549 296 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AL356390.1-201ENST00000455684 397 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.1□□□□□ -1.91
RPL39P62891 RPS27AP17-201ENST00000463344 455 ntBASIC3.1□□□□□ -1.91
RPL39P62891 COPS8P2-201ENST00000473228 627 ntBASIC3.1□□□□□ -1.91
RPL39P62891 RN7SL30P-201ENST00000488416 306 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.1□□□□□ -1.91
RPL39P62891 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.1□□□□□ -1.91
RPL39P62891 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 AC139783.2-201ENST00000504847 1145 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 AC007016.1-201ENST00000512110 244 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 BTF3P13-201ENST00000513224 490 ntBASIC3.1□□□□□ -1.91
RPL39P62891 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 AP001880.2-201ENST00000538233 448 ntBASIC3.1□□□□□ -1.91
RPL39P62891 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.1□□□□□ -1.91
RPL39P62891 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.1□□□□□ -1.91
RPL39P62891 AP005119.2-201ENST00000579735 1105 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 MIR432-201ENST00000606207 94 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC012603.1-201ENST00000606424 528 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AC009163.6-201ENST00000612367 342 ntBASIC3.1□□□□□ -1.91
RPL39P62891 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.1□□□□□ -1.91
RPL39P62891 AC006065.6-201ENST00000625201 545 ntBASIC3.1□□□□□ -1.91
RPL39P62891 TMEM30CP-203ENST00000637814 1035 ntBASIC3.1□□□□□ -1.91
RPL39P62891 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RPL39P62891 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.1□□□□□ -1.91
RPL39P62891 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 AC105074.1-201ENST00000623380 3095 ntBASIC3.1□□□□□ -1.91
RPL39P62891 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPL39P62891 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RPL39P62891 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.09□□□□□ -1.91
RPL39P62891 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPL39P62891 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPL39P62891 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.09□□□□□ -1.91
RPL39P62891 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.09□□□□□ -1.91
RPL39P62891 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.09□□□□□ -1.91
RPL39P62891 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPL39P62891 RNA5SP191-201ENST00000362585 102 ntBASIC3.09□□□□□ -1.91
RPL39P62891 RNU4-4P-201ENST00000364588 130 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms