Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VBP1P61758 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VBP1P61758 AL136116.2-201ENST00000404020 785 ntBASIC4.21□□□□□ -1.74
VBP1P61758 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
VBP1P61758 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.21□□□□□ -1.74
VBP1P61758 RPL7P53-201ENST00000421245 739 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC066692.1-201ENST00000421721 457 ntBASIC4.21□□□□□ -1.74
VBP1P61758 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VBP1P61758 AC108075.1-201ENST00000424692 529 ntBASIC4.21□□□□□ -1.74
VBP1P61758 FAM96AP1-201ENST00000430879 482 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.21□□□□□ -1.74
VBP1P61758 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 RPL7P28-201ENST00000437739 740 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 OR52E7P-201ENST00000452394 933 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC090013.1-201ENST00000485147 480 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC106872.2-201ENST00000494303 480 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC015864.1-201ENST00000496512 544 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.21□□□□□ -1.74
VBP1P61758 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.21□□□□□ -1.74
VBP1P61758 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC079600.1-201ENST00000550326 297 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AL049839.1-201ENST00000556151 657 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.21□□□□□ -1.74
VBP1P61758 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.21□□□□□ -1.74
VBP1P61758 AC079315.1-201ENST00000602952 623 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC090953.1-201ENST00000604305 1092 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AC008966.2-201ENST00000606157 453 ntBASIC4.21□□□□□ -1.74
VBP1P61758 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.21□□□□□ -1.74
VBP1P61758 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 OR10AB1P-202ENST00000641219 1686 ntBASIC4.21□□□□□ -1.74
VBP1P61758 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
VBP1P61758 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
VBP1P61758 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 MTCO1P14-201ENST00000441695 1559 ntBASIC4.2□□□□□ -1.74
VBP1P61758 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VBP1P61758 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
VBP1P61758 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 SNORD74.4-201ENST00000364129 80 ntBASIC4.2□□□□□ -1.74
VBP1P61758 RNA5SP122-201ENST00000384457 108 ntBASIC4.2□□□□□ -1.74
VBP1P61758 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 RNA5SP231-201ENST00000410496 138 ntBASIC4.2□□□□□ -1.74
VBP1P61758 RNA5SP345-201ENST00000410646 108 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AC098592.2-201ENST00000413158 265 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.2□□□□□ -1.74
VBP1P61758 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 LINC00993-201ENST00000420453 540 ntBASIC4.2□□□□□ -1.74
VBP1P61758 RPL21P43-201ENST00000425440 472 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AC115283.1-201ENST00000427353 400 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.2□□□□□ -1.74
VBP1P61758 RPL21P91-201ENST00000429231 479 ntBASIC4.2□□□□□ -1.74
VBP1P61758 HLA-N-201ENST00000437516 135 ntBASIC4.2□□□□□ -1.74
VBP1P61758 RAB9AP5-201ENST00000437794 597 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AL356121.1-201ENST00000442911 156 ntBASIC4.2□□□□□ -1.74
VBP1P61758 RAB9AP2-201ENST00000443911 597 ntBASIC4.2□□□□□ -1.74
VBP1P61758 HMGB3P21-201ENST00000452483 547 ntBASIC4.2□□□□□ -1.74
VBP1P61758 FABP3P2-201ENST00000453169 399 ntBASIC4.2□□□□□ -1.74
VBP1P61758 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.2□□□□□ -1.74
VBP1P61758 OR8X1P-201ENST00000534542 869 ntBASIC4.2□□□□□ -1.74
VBP1P61758 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 MIR3154-201ENST00000577829 84 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AC069307.1-201ENST00000602820 447 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AC105254.2-201ENST00000603636 436 ntBASIC4.2□□□□□ -1.74
VBP1P61758 AC010200.2-201ENST00000605098 235 ntBASIC4.2□□□□□ -1.74
VBP1P61758 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.2□□□□□ -1.74
VBP1P61758 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.2□□□□□ -1.74
VBP1P61758 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.2□□□□□ -1.74
VBP1P61758 CASC19-274ENST00000642018 970 ntBASIC4.2□□□□□ -1.74
VBP1P61758 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 AL136164.3-201ENST00000624429 3978 ntBASIC4.2□□□□□ -1.74
VBP1P61758 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VBP1P61758 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VBP1P61758 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.19□□□□□ -1.74
VBP1P61758 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms