Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS1BP61024 AC090181.2-201ENST00000602975 672 ntBASIC3.43□□□□□ -1.86
CKS1BP61024 AC023043.4-201ENST00000612081 449 ntBASIC3.43□□□□□ -1.86
CKS1BP61024 AC004943.3-201ENST00000624116 600 ntBASIC3.43□□□□□ -1.86
CKS1BP61024 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS1BP61024 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS1BP61024 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 AC092162.3-201ENST00000624511 1624 ntBASIC3.43□□□□□ -1.86
CKS1BP61024 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CKS1BP61024 MFSD8-220ENST00000641243 1422 ntBASIC3.43□□□□□ -1.86
CKS1BP61024 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS1BP61024 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS1BP61024 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS1BP61024 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 RN7SKP275-201ENST00000364626 301 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 RNA5SP90-201ENST00000364801 99 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 LYPLA1P3-201ENST00000402650 695 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS1BP61024 RN7SKP16-201ENST00000410180 299 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 SLC20A1P1-201ENST00000413906 956 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
CKS1BP61024 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AL139148.1-201ENST00000427122 680 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 DYNLL1P7-201ENST00000429273 258 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC002504.1-201ENST00000438281 691 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC108161.1-201ENST00000461060 402 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 RN7SL443P-201ENST00000464331 290 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AL133445.1-201ENST00000467051 452 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AC073073.1-201ENST00000493920 463 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS1BP61024 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 GTF2F2P1-201ENST00000511083 675 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS1BP61024 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 BLZF2P-201ENST00000553776 1130 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS1BP61024 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS1BP61024 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CKS1BP61024 AC008814.1-201ENST00000603797 406 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 AL049844.2-201ENST00000604280 628 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 C2orf27A-204ENST00000623058 969 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 CU639417.4-201ENST00000623928 207 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS1BP61024 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 ERCC6-202ENST00000374127 1782 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS1BP61024 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS1BP61024 SAMMSON-226ENST00000642089 1582 ntBASIC3.42□□□□□ -1.86
CKS1BP61024 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
CKS1BP61024 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS1BP61024 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 MIR513A2-201ENST00000385249 127 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 RNU1-149P-201ENST00000390870 161 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms