Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 AC021006.1-201ENST00000489849 553 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC008629.2-201ENST00000503783 483 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 IGKV2D-10-201ENST00000520194 281 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.31□□□□□ -1.56
CLRN1P58418 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC092332.1-201ENST00000563684 829 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 OR4K7P-201ENST00000580232 945 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 MIR3611-201ENST00000584484 83 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 AL136981.2-201ENST00000617319 734 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL590240.3-201ENST00000621416 943 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC021106.3-201ENST00000623925 531 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 SNX18P12-201ENST00000624821 759 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AL357562.1-201ENST00000624911 609 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC073488.3-201ENST00000631611 778 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 AC111152.1-202ENST00000635848 339 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CLRN1P58418 AC140479.2-201ENST00000421567 3130 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 Z99496.1-201ENST00000469424 1477 ntBASIC5.31□□□□□ -1.56
CLRN1P58418 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.31□□□□□ -1.56
CLRN1P58418 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CLRN1P58418 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLRN1P58418 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLRN1P58418 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 RNA5SP211-201ENST00000365516 117 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-1320P-201ENST00000390838 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-1269P-201ENST00000391139 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AL136131.1-201ENST00000406079 803 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.3□□□□□ -1.56
CLRN1P58418 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 CENPIP1-201ENST00000425713 902 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 AL137845.2-201ENST00000444292 988 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AL445466.1-201ENST00000448432 357 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AC104306.1-201ENST00000449702 371 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AL935212.3-201ENST00000450729 284 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 PNPLA4P1-201ENST00000458328 305 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-599P-201ENST00000459383 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-1193P-201ENST00000459461 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AL603882.1-201ENST00000463059 681 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CLRN1P58418 MTATP6P22-201ENST00000507369 598 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 LTV1P1-201ENST00000510683 1237 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC022447.1-201ENST00000515358 464 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-1225P-201ENST00000516336 65 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC106038.2-201ENST00000520706 568 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC022146.1-201ENST00000595307 847 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 U73023.1-201ENST00000603134 700 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 AL021918.2-201ENST00000613415 194 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-368P-201ENST00000620928 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 RNU6-538P-201ENST00000622329 107 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms