Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GFRA1P56159 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA1P56159 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
GFRA1P56159 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA1P56159 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GFRA1P56159 AL136984.1-201ENST00000607611 1893 ntBASIC5.77□□□□□ -1.49
GFRA1P56159 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.77□□□□□ -1.49
GFRA1P56159 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 AKAP17BP-201ENST00000431706 2719 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 CUBNP3-201ENST00000457461 1784 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 RNA5SP232-201ENST00000364144 119 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 RNU6-867P-201ENST00000364956 107 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 RNU5A-6P-201ENST00000384136 116 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 AL157702.1-201ENST00000398764 426 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC025750.1-201ENST00000399891 379 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AL139805.1-201ENST00000407837 289 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 MIR548F1-201ENST00000408667 84 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 MIR1275-201ENST00000408770 80 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC073264.1-201ENST00000411508 416 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC109780.2-201ENST00000413467 845 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 RPL30P16-201ENST00000419341 429 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC009237.2-201ENST00000421358 284 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 NEK4P1-201ENST00000433383 879 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AL596276.1-201ENST00000434465 418 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 GAPDHP59-201ENST00000435908 267 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 RBMX2P4-201ENST00000441256 376 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 POU5F1P5-201ENST00000445059 658 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 OR52E7P-201ENST00000452394 933 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.76□□□□□ -1.49
GFRA1P56159 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 RPL12P31-201ENST00000478433 450 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 OR4G11P-201ENST00000492842 939 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC112484.3-201ENST00000505910 329 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 ST13P12-201ENST00000508958 1094 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC018797.1-201ENST00000510791 255 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 KHDC1P1-201ENST00000511053 508 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 MTND5P4-201ENST00000514978 288 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.76□□□□□ -1.49
GFRA1P56159 RNU6-506P-201ENST00000516553 94 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 COX6B1P4-201ENST00000519826 484 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 DEFB108A-201ENST00000530110 222 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA1P56159 OR6C73P-201ENST00000546432 358 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC091489.2-201ENST00000566263 604 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 MIR3154-201ENST00000577829 84 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
GFRA1P56159 OR4G1P-201ENST00000588632 938 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC115085.1-201ENST00000588924 229 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA1P56159 AC115286.1-201ENST00000604298 434 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 TAS2R6P-201ENST00000605022 826 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 uc_338.31-201ENST00000615595 186 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA1P56159 AL683826.1-201ENST00000624104 627 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 AC008957.3-201ENST00000624112 2242 ntBASIC5.76□□□□□ -1.49
GFRA1P56159 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA1P56159 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms