Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
CDH12P55289 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH12P55289 VN2R3P-201ENST00000422626 1412 ntBASIC4.9□□□□□ -1.62
CDH12P55289 MTCO1P18-201ENST00000455518 1419 ntBASIC4.9□□□□□ -1.62
CDH12P55289 MRRFP1-201ENST00000435941 1675 ntBASIC4.9□□□□□ -1.62
CDH12P55289 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH12P55289 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CDH12P55289 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 RNA5SP510-201ENST00000364697 99 ntBASIC4.9□□□□□ -1.63
CDH12P55289 RNA5SP223-201ENST00000365174 120 ntBASIC4.9□□□□□ -1.63
CDH12P55289 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 RNA5SP284-201ENST00000384547 118 ntBASIC4.9□□□□□ -1.63
CDH12P55289 TAS2R15P-201ENST00000390674 928 ntBASIC4.9□□□□□ -1.63
CDH12P55289 MCTS2P-201ENST00000394552 546 ntBASIC4.9□□□□□ -1.63
CDH12P55289 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
CDH12P55289 HMGB3P31-201ENST00000413333 595 ntBASIC4.9□□□□□ -1.63
CDH12P55289 Z93019.1-201ENST00000416450 973 ntBASIC4.9□□□□□ -1.63
CDH12P55289 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 TNPO1P1-201ENST00000423641 1138 ntBASIC4.9□□□□□ -1.63
CDH12P55289 SRSF1P1-201ENST00000424058 520 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 RPL23AP4-201ENST00000427757 463 ntBASIC4.9□□□□□ -1.63
CDH12P55289 GSTM5P1-201ENST00000434751 660 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 AC064862.4-201ENST00000442180 334 ntBASIC4.9□□□□□ -1.63
CDH12P55289 VN1R25P-201ENST00000443385 738 ntBASIC4.9□□□□□ -1.63
CDH12P55289 Z77249.1-201ENST00000444622 1175 ntBASIC4.9□□□□□ -1.63
CDH12P55289 RPL36AP39-201ENST00000445859 318 ntBASIC4.9□□□□□ -1.63
CDH12P55289 MTATP6P26-201ENST00000445926 662 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 AC084754.1-201ENST00000463466 464 ntBASIC4.9□□□□□ -1.63
CDH12P55289 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 HMGB1P44-201ENST00000508597 572 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH12P55289 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH12P55289 AC087897.1-201ENST00000550134 156 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AL109741.3-201ENST00000561748 592 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 MIR4505-201ENST00000582238 73 ntBASIC4.9□□□□□ -1.63
CDH12P55289 GAS5-AS1-201ENST00000602767 694 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AP002906.1-201ENST00000603405 233 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AL121890.3-201ENST00000618494 516 ntBASIC4.9□□□□□ -1.63
CDH12P55289 AC120349.3-201ENST00000624377 529 ntBASIC4.9□□□□□ -1.63
CDH12P55289 CU459211.1-201ENST00000635667 749 ntBASIC4.9□□□□□ -1.63
CDH12P55289 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 AC100778.3-201ENST00000580060 1750 ntBASIC4.9□□□□□ -1.63
CDH12P55289 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH12P55289 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CDH12P55289 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH12P55289 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AC063976.2-201ENST00000425667 3556 ntBASIC4.89□□□□□ -1.63
CDH12P55289 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 MIR589-201ENST00000385238 99 ntBASIC4.89□□□□□ -1.63
CDH12P55289 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 NAP1L4P2-201ENST00000425958 899 ntBASIC4.89□□□□□ -1.63
CDH12P55289 GTF2IP3-201ENST00000433887 494 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AC073109.1-201ENST00000445066 978 ntBASIC4.89□□□□□ -1.63
CDH12P55289 SEPT14P24-201ENST00000447236 180 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC105399.1-202ENST00000447303 205 ntBASIC4.89□□□□□ -1.63
CDH12P55289 Z73417.1-201ENST00000447373 778 ntBASIC4.89□□□□□ -1.63
CDH12P55289 NOP56P2-201ENST00000447491 769 ntBASIC4.89□□□□□ -1.63
CDH12P55289 RBMY2TP-201ENST00000451162 947 ntBASIC4.89□□□□□ -1.63
CDH12P55289 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC096992.1-201ENST00000459808 709 ntBASIC4.89□□□□□ -1.63
CDH12P55289 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 AC058823.1-201ENST00000485315 474 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms