Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 U3.22-201ENST00000391120 215 ntBASIC5.32□□□□□ -1.56
VCPP55072 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 RN7SKP114-201ENST00000410327 279 ntBASIC5.32□□□□□ -1.56
VCPP55072 OR51A6P-201ENST00000418680 1004 ntBASIC5.32□□□□□ -1.56
VCPP55072 AC004074.1-201ENST00000421810 1063 ntBASIC5.32□□□□□ -1.56
VCPP55072 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.32□□□□□ -1.56
VCPP55072 HSPE1P16-201ENST00000426640 348 ntBASIC5.32□□□□□ -1.56
VCPP55072 TRGV7-201ENST00000427089 353 ntBASIC5.32□□□□□ -1.56
VCPP55072 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.32□□□□□ -1.56
VCPP55072 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.32□□□□□ -1.56
VCPP55072 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.32□□□□□ -1.56
VCPP55072 RPL21P129-201ENST00000491732 478 ntBASIC5.32□□□□□ -1.56
VCPP55072 AC091917.2-201ENST00000505002 744 ntBASIC5.32□□□□□ -1.56
VCPP55072 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.32□□□□□ -1.56
VCPP55072 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 RN7SKP260-201ENST00000516907 149 ntBASIC5.32□□□□□ -1.56
VCPP55072 RN7SKP92-201ENST00000517266 244 ntBASIC5.32□□□□□ -1.56
VCPP55072 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.32□□□□□ -1.56
VCPP55072 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.32□□□□□ -1.56
VCPP55072 AC021483.2-201ENST00000567415 758 ntBASIC5.32□□□□□ -1.56
VCPP55072 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.32□□□□□ -1.56
VCPP55072 AP005212.4-201ENST00000614206 710 ntBASIC5.32□□□□□ -1.56
VCPP55072 MLECP1-201ENST00000615893 709 ntBASIC5.32□□□□□ -1.56
VCPP55072 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 AL022322.2-201ENST00000624072 20397 ntBASIC5.32□□□□□ -1.56
VCPP55072 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VCPP55072 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.32□□□□□ -1.56
VCPP55072 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.32□□□□□ -1.56
VCPP55072 AC107021.2-201ENST00000567714 2095 ntBASIC5.32□□□□□ -1.56
VCPP55072 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 AL731532.2-201ENST00000623542 1953 ntBASIC5.31□□□□□ -1.56
VCPP55072 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
VCPP55072 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 RLIMP2-201ENST00000427891 1563 ntBASIC5.31□□□□□ -1.56
VCPP55072 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 RPS3AP23-201ENST00000401762 784 ntBASIC5.31□□□□□ -1.56
VCPP55072 AP002530.1-201ENST00000405705 684 ntBASIC5.31□□□□□ -1.56
VCPP55072 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.31□□□□□ -1.56
VCPP55072 CENPIP1-201ENST00000425713 902 ntBASIC5.31□□□□□ -1.56
VCPP55072 MTCO1P51-201ENST00000427672 1060 ntBASIC5.31□□□□□ -1.56
VCPP55072 BMS1P19-201ENST00000433925 393 ntBASIC5.31□□□□□ -1.56
VCPP55072 RPL35AP21-201ENST00000437667 333 ntBASIC5.31□□□□□ -1.56
VCPP55072 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 TPT1P1-201ENST00000458495 518 ntBASIC5.31□□□□□ -1.56
VCPP55072 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 PPM1AP1-201ENST00000502740 1135 ntBASIC5.31□□□□□ -1.56
VCPP55072 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
VCPP55072 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.31□□□□□ -1.56
VCPP55072 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 AC122134.1-201ENST00000565664 1104 ntBASIC5.31□□□□□ -1.56
VCPP55072 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.31□□□□□ -1.56
VCPP55072 AP005432.2-201ENST00000608162 586 ntBASIC5.31□□□□□ -1.56
VCPP55072 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VCPP55072 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
VCPP55072 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
VCPP55072 ASNSP1-204ENST00000641977 1664 ntBASIC5.31□□□□□ -1.56
VCPP55072 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VCPP55072 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VCPP55072 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
VCPP55072 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VCPP55072 RNU4-44P-201ENST00000363050 141 ntBASIC5.3□□□□□ -1.56
VCPP55072 BMS1P3-201ENST00000372011 932 ntBASIC5.3□□□□□ -1.56
VCPP55072 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VCPP55072 RNA5SP113-201ENST00000410486 84 ntBASIC5.3□□□□□ -1.56
VCPP55072 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VCPP55072 RPS27AP7-201ENST00000422792 455 ntBASIC5.3□□□□□ -1.56
VCPP55072 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
VCPP55072 COX6CP13-201ENST00000428703 226 ntBASIC5.3□□□□□ -1.56
VCPP55072 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 MRPL35P2-201ENST00000448009 511 ntBASIC5.3□□□□□ -1.56
VCPP55072 AC034236.1-201ENST00000469891 373 ntBASIC5.3□□□□□ -1.56
VCPP55072 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 COX6B1P5-201ENST00000509843 249 ntBASIC5.3□□□□□ -1.56
VCPP55072 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.3□□□□□ -1.56
VCPP55072 AC084824.1-201ENST00000550917 1005 ntBASIC5.3□□□□□ -1.56
VCPP55072 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms