Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 AC140134.1-201ENST00000511830 3544 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGCS2P54868 SAMM50P1-201ENST00000455403 1399 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 RNU11-201ENST00000387069 134 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 SNORA57.1-201ENST00000391227 145 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGCS2P54868 RAD23BP1-201ENST00000421404 1227 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 RPL7P57-201ENST00000423238 740 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 KCTD10P1-201ENST00000434203 625 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS2P54868 CYCSP24-201ENST00000445119 316 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 NUTF2P3-201ENST00000448540 384 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 RN7SL810P-201ENST00000493031 276 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 SUMO2P4-201ENST00000504193 276 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AC098799.3-201ENST00000506095 438 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AP000827.1-201ENST00000527814 258 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGCS2P54868 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS2P54868 AC090286.3-201ENST00000573133 187 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS2P54868 AL360012.1-201ENST00000602813 131 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AC091979.2-201ENST00000607514 214 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AL354950.1-201ENST00000614150 568 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AL445567.2-201ENST00000618935 498 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 AP000648.2-201ENST00000624182 404 ntBASIC5.34□□□□□ -1.55
HMGCS2P54868 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HMGCS2P54868 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGCS2P54868 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS2P54868 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS2P54868 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
HMGCS2P54868 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
HMGCS2P54868 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
HMGCS2P54868 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
HMGCS2P54868 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
HMGCS2P54868 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS2P54868 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS2P54868 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HMGCS2P54868 VN2R3P-201ENST00000422626 1412 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 SALL4P2-201ENST00000423288 2910 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 RNA5SP28-201ENST00000363841 119 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HMGCS2P54868 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 SNORA70C-201ENST00000384538 135 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC011933.1-201ENST00000413334 321 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC079809.1-201ENST00000415468 276 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 E2F6P2-201ENST00000420708 748 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS2P54868 AP001324.1-201ENST00000428553 399 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS2P54868 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS2P54868 RPL35AP21-201ENST00000437667 333 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS2P54868 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS2P54868 RPL7AP52-201ENST00000458096 790 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC245028.2-201ENST00000458673 253 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC116533.1-201ENST00000459748 321 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
HMGCS2P54868 MTCO3P42-201ENST00000509488 518 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 MTCO3P39-201ENST00000514812 518 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 SNORA31.9-201ENST00000516429 84 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGCS2P54868 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS2P54868 Z95327.3-201ENST00000610385 572 ntBASIC5.33□□□□□ -1.56
HMGCS2P54868 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS2P54868 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS2P54868 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AL031119.1-201ENST00000404707 1879 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AC135352.1-201ENST00000506173 1418 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS2P54868 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 DDX18P5-201ENST00000534547 1306 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AL121657.1-201ENST00000327215 531 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 RPS12P10-201ENST00000427031 377 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AC011998.1-201ENST00000433403 117 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC239367.2-201ENST00000447309 705 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS2P54868 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC087477.6-201ENST00000559595 843 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms