Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC245389.2-201ENST00000616023 576 ntBASIC5.43□□□□□ -1.54
HOXD13P35453 AC242843.1-201ENST00000618702 573 ntBASIC5.43□□□□□ -1.54
HOXD13P35453 AP002799.1-201ENST00000623552 423 ntBASIC5.43□□□□□ -1.54
HOXD13P35453 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXD13P35453 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD13P35453 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
HOXD13P35453 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXD13P35453 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD13P35453 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD13P35453 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD13P35453 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXD13P35453 TCP1P3-201ENST00000414406 1498 ntBASIC5.43□□□□□ -1.54
HOXD13P35453 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD13P35453 SAMMSON-213ENST00000641336 1521 ntBASIC5.43□□□□□ -1.54
HOXD13P35453 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HOXD13P35453 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 AL731532.2-201ENST00000623542 1953 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC009643.2-201ENST00000603543 1448 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 SNORA73.1-201ENST00000363107 205 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 RNA5SP123-201ENST00000363244 119 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 RNU6-452P-201ENST00000384406 107 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 RNA5SP345-201ENST00000410646 108 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 AC093414.1-201ENST00000434712 514 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AL627308.1-201ENST00000435693 821 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AL137845.2-201ENST00000444292 988 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC099063.2-201ENST00000446360 662 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 CLIC4P1-201ENST00000453177 535 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXD13P35453 RPL7P48-201ENST00000461513 746 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXD13P35453 AC074386.1-201ENST00000476560 767 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 RN7SL97P-201ENST00000486780 299 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD13P35453 AC093890.1-201ENST00000502554 540 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC008638.1-201ENST00000506035 866 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD13P35453 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXD13P35453 HAUS1P3-201ENST00000523909 662 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD13P35453 ZNF92P2-201ENST00000600543 1059 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD13P35453 AP001033.2-201ENST00000609701 1003 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC009163.6-201ENST00000612367 342 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AL049794.2-201ENST00000616301 365 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD13P35453 AC024023.1-201ENST00000624530 922 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXD13P35453 AC009313.2-201ENST00000417893 1941 ntBASIC5.42□□□□□ -1.54
HOXD13P35453 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HOXD13P35453 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD13P35453 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
HOXD13P35453 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD13P35453 HMGB1P13-201ENST00000406019 642 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 TBCAP2-201ENST00000416175 326 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 AC093162.1-201ENST00000419682 124 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 AL645608.4-201ENST00000423619 154 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 MORF4L1P7-201ENST00000426038 703 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 RBMY2QP-201ENST00000429799 1147 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 BX119904.1-201ENST00000432026 348 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 AL035458.1-201ENST00000433096 585 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD13P35453 YWHAZP2-201ENST00000440317 728 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD13P35453 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXD13P35453 TRY2P-201ENST00000448860 689 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD13P35453 RPL7AP52-201ENST00000458096 790 ntBASIC5.41□□□□□ -1.54
HOXD13P35453 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD13P35453 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD13P35453 RN7SL319P-201ENST00000480656 221 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms