Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 MIR192-201ENST00000384915 110 ntBASIC4.68□□□□□ -1.66
RORAP35398 AL136131.1-201ENST00000406079 803 ntBASIC4.68□□□□□ -1.66
RORAP35398 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.68□□□□□ -1.66
RORAP35398 AC004074.1-201ENST00000421810 1063 ntBASIC4.68□□□□□ -1.66
RORAP35398 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.68□□□□□ -1.66
RORAP35398 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 TXNP5-201ENST00000441043 315 ntBASIC4.68□□□□□ -1.66
RORAP35398 CEACAMP9-201ENST00000442990 513 ntBASIC4.68□□□□□ -1.66
RORAP35398 AL157385.1-201ENST00000446973 268 ntBASIC4.68□□□□□ -1.66
RORAP35398 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 SLC25A18P1-201ENST00000449385 454 ntBASIC4.68□□□□□ -1.66
RORAP35398 AL356390.1-201ENST00000455684 397 ntBASIC4.68□□□□□ -1.66
RORAP35398 AC245028.2-201ENST00000458673 253 ntBASIC4.68□□□□□ -1.66
RORAP35398 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 NIP7P2-201ENST00000485801 544 ntBASIC4.68□□□□□ -1.66
RORAP35398 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 AC138938.1-201ENST00000515431 782 ntBASIC4.68□□□□□ -1.66
RORAP35398 RNA5SP392-201ENST00000516905 112 ntBASIC4.68□□□□□ -1.66
RORAP35398 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.68□□□□□ -1.66
RORAP35398 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.68□□□□□ -1.66
RORAP35398 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.68□□□□□ -1.66
RORAP35398 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.68□□□□□ -1.66
RORAP35398 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 AL512782.1-201ENST00000603093 364 ntBASIC4.68□□□□□ -1.66
RORAP35398 AC233280.2-201ENST00000603917 1070 ntBASIC4.68□□□□□ -1.66
RORAP35398 SNORA35B-201ENST00000607417 129 ntBASIC4.68□□□□□ -1.66
RORAP35398 MIR6780A-201ENST00000615089 68 ntBASIC4.68□□□□□ -1.66
RORAP35398 ECM1P2-201ENST00000503354 1577 ntBASIC4.68□□□□□ -1.66
RORAP35398 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.68□□□□□ -1.66
RORAP35398 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
RORAP35398 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
RORAP35398 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.68□□□□□ -1.66
RORAP35398 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RORAP35398 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RORAP35398 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 RNA5SP191-201ENST00000362585 102 ntBASIC4.67□□□□□ -1.66
RORAP35398 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 LRRC37BP1-201ENST00000398851 714 ntBASIC4.67□□□□□ -1.66
RORAP35398 AL807761.1-201ENST00000417622 171 ntBASIC4.67□□□□□ -1.66
RORAP35398 AC245028.1-201ENST00000423259 256 ntBASIC4.67□□□□□ -1.66
RORAP35398 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 AL138878.2-201ENST00000440581 1241 ntBASIC4.67□□□□□ -1.66
RORAP35398 HMGB3P9-201ENST00000441799 583 ntBASIC4.67□□□□□ -1.66
RORAP35398 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.67□□□□□ -1.66
RORAP35398 AC011753.3-201ENST00000443436 406 ntBASIC4.67□□□□□ -1.66
RORAP35398 RPL36AP15-201ENST00000444514 266 ntBASIC4.67□□□□□ -1.66
RORAP35398 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.67□□□□□ -1.66
RORAP35398 AURKAPS2-201ENST00000454983 333 ntBASIC4.67□□□□□ -1.66
RORAP35398 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.67□□□□□ -1.66
RORAP35398 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.67□□□□□ -1.66
RORAP35398 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
RORAP35398 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.67□□□□□ -1.66
RORAP35398 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.67□□□□□ -1.66
RORAP35398 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.67□□□□□ -1.66
RORAP35398 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
RORAP35398 AC116553.2-201ENST00000564203 463 ntBASIC4.67□□□□□ -1.66
RORAP35398 AC234771.5-201ENST00000600161 514 ntBASIC4.67□□□□□ -1.66
RORAP35398 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RORAP35398 AC011453.2-201ENST00000603737 729 ntBASIC4.67□□□□□ -1.66
RORAP35398 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 MIR7703-201ENST00000620784 77 ntBASIC4.67□□□□□ -1.66
RORAP35398 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 AC015908.5-201ENST00000623289 343 ntBASIC4.67□□□□□ -1.66
RORAP35398 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RORAP35398 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RORAP35398 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
RORAP35398 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.66□□□□□ -1.66
RORAP35398 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.66□□□□□ -1.66
RORAP35398 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RORAP35398 AC079741.1-201ENST00000321498 212 ntBASIC4.66□□□□□ -1.66
RORAP35398 RNA5SP105-201ENST00000391123 113 ntBASIC4.66□□□□□ -1.66
RORAP35398 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.66□□□□□ -1.66
RORAP35398 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.66□□□□□ -1.66
RORAP35398 AC019050.1-201ENST00000418508 492 ntBASIC4.66□□□□□ -1.66
RORAP35398 AC013429.2-201ENST00000418798 781 ntBASIC4.66□□□□□ -1.66
RORAP35398 AL358176.3-201ENST00000420757 454 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms