Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPA3P35244 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.66□□□□□ -1.66
RPA3P35244 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.66□□□□□ -1.66
RPA3P35244 MIR3667-201ENST00000581025 74 ntBASIC4.66□□□□□ -1.66
RPA3P35244 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.66□□□□□ -1.66
RPA3P35244 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.66□□□□□ -1.66
RPA3P35244 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.66□□□□□ -1.66
RPA3P35244 MIR7154-201ENST00000620673 73 ntBASIC4.66□□□□□ -1.66
RPA3P35244 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RPA3P35244 NCLP2-201ENST00000416078 1462 ntBASIC4.66□□□□□ -1.66
RPA3P35244 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RPA3P35244 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.66□□□□□ -1.66
RPA3P35244 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPA3P35244 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPA3P35244 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
RPA3P35244 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPA3P35244 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.65□□□□□ -1.66
RPA3P35244 AC091046.3-201ENST00000631455 1574 ntBASIC4.65□□□□□ -1.66
RPA3P35244 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RPA3P35244 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPA3P35244 AC092111.2-201ENST00000611627 1414 ntBASIC4.65□□□□□ -1.66
RPA3P35244 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPA3P35244 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPA3P35244 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
RPA3P35244 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 U3.30-201ENST00000391308 210 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AC007068.1-201ENST00000396690 844 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.65□□□□□ -1.67
RPA3P35244 OR51B3P-201ENST00000412287 913 ntBASIC4.65□□□□□ -1.67
RPA3P35244 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.65□□□□□ -1.67
RPA3P35244 AL034379.1-201ENST00000423216 253 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.65□□□□□ -1.67
RPA3P35244 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.65□□□□□ -1.67
RPA3P35244 RBMY2TP-201ENST00000451162 947 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AP000942.1-201ENST00000463969 747 ntBASIC4.65□□□□□ -1.67
RPA3P35244 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AC012158.1-204ENST00000483430 465 ntBASIC4.65□□□□□ -1.67
RPA3P35244 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.65□□□□□ -1.67
RPA3P35244 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.65□□□□□ -1.67
RPA3P35244 RFPL4AP3-201ENST00000515267 345 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AC090151.1-201ENST00000520784 730 ntBASIC4.65□□□□□ -1.67
RPA3P35244 BUD31P1-201ENST00000521828 359 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.65□□□□□ -1.67
RPA3P35244 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.65□□□□□ -1.67
RPA3P35244 AL390334.1-201ENST00000556395 450 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.65□□□□□ -1.67
RPA3P35244 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
RPA3P35244 HMGB2P1-201ENST00000591146 634 ntBASIC4.65□□□□□ -1.67
RPA3P35244 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RPA3P35244 AC008966.2-201ENST00000606157 453 ntBASIC4.65□□□□□ -1.67
RPA3P35244 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.65□□□□□ -1.67
RPA3P35244 SNX18P1Y-201ENST00000616231 511 ntBASIC4.65□□□□□ -1.67
RPA3P35244 AL669942.2-201ENST00000620352 697 ntBASIC4.65□□□□□ -1.67
RPA3P35244 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RPA3P35244 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.65□□□□□ -1.67
RPA3P35244 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
RPA3P35244 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.67
RPA3P35244 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPA3P35244 SDAD1P1-202ENST00000524156 2051 ntBASIC4.65□□□□□ -1.67
RPA3P35244 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 Z95327.2-201ENST00000414579 1873 ntBASIC4.64□□□□□ -1.67
RPA3P35244 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 AC007382.1-201ENST00000624376 2618 ntBASIC4.64□□□□□ -1.67
RPA3P35244 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPA3P35244 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RPA3P35244 RNU1-108P-201ENST00000362556 161 ntBASIC4.64□□□□□ -1.67
RPA3P35244 RNU6-249P-201ENST00000363016 102 ntBASIC4.64□□□□□ -1.67
RPA3P35244 RNU1-82P-201ENST00000390851 165 ntBASIC4.64□□□□□ -1.67
RPA3P35244 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.64□□□□□ -1.67
RPA3P35244 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.64□□□□□ -1.67
RPA3P35244 RPS5P7-201ENST00000456664 608 ntBASIC4.64□□□□□ -1.67
RPA3P35244 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.64□□□□□ -1.67
RPA3P35244 AC090013.1-201ENST00000485147 480 ntBASIC4.64□□□□□ -1.67
RPA3P35244 AC083982.1-201ENST00000485679 344 ntBASIC4.64□□□□□ -1.67
RPA3P35244 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.64□□□□□ -1.67
RPA3P35244 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.64□□□□□ -1.67
RPA3P35244 RNU1-6P-201ENST00000516290 144 ntBASIC4.64□□□□□ -1.67
RPA3P35244 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.64□□□□□ -1.67
RPA3P35244 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.64□□□□□ -1.67
RPA3P35244 MTND6P33-201ENST00000571794 183 ntBASIC4.64□□□□□ -1.67
RPA3P35244 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.64□□□□□ -1.67
RPA3P35244 AC007448.1-201ENST00000582714 234 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms