Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 USP9YP2-201ENST00000504503 1000 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA9P31269 USP9YP1-201ENST00000513521 1002 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA9P31269 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA9P31269 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HOXA9P31269 AC006349.1-201ENST00000555526 235 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 SETP1-201ENST00000556014 845 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AC084783.1-201ENST00000565846 910 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA9P31269 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 MIR4675-201ENST00000577898 77 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AP005262.1-201ENST00000582646 997 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AL590392.1-201ENST00000604960 446 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AC100847.1-201ENST00000611316 481 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
HOXA9P31269 AC004232.3-201ENST00000622977 525 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AC002044.3-201ENST00000623314 541 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AL049536.1-201ENST00000625043 744 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AC006453.5-201ENST00000636451 619 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA9P31269 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXA9P31269 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA9P31269 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HOXA9P31269 AC120338.1-201ENST00000625074 1541 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HOXA9P31269 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.61
HOXA9P31269 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.96□□□□□ -1.61
HOXA9P31269 AC100778.3-201ENST00000580060 1750 ntBASIC4.96□□□□□ -1.61
HOXA9P31269 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
HOXA9P31269 STX3-208ENST00000641815 3236 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXA9P31269 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXA9P31269 AC133552.1-201ENST00000569988 4007 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HOXA9P31269 SNORA71.2-201ENST00000364941 134 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 AC073143.1-201ENST00000436316 395 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXA9P31269 RPL7L1P1-201ENST00000448259 785 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXA9P31269 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 STRADBP1-201ENST00000478954 1281 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 RPL36AP41-201ENST00000493820 306 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXA9P31269 MTND4LP2-201ENST00000502312 285 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 NIFKP7-201ENST00000503365 834 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 AC015795.1-201ENST00000513669 327 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXA9P31269 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXA9P31269 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXA9P31269 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXA9P31269 AGGF1P9-201ENST00000561884 913 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXA9P31269 AC020910.2-201ENST00000603635 610 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 AC115286.1-201ENST00000604298 434 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXA9P31269 AL121873.1-201ENST00000616013 524 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 AL035461.2-201ENST00000619201 524 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 MUC2-202ENST00000613187 4845 ntBASIC4.96□□□□□ -1.62
HOXA9P31269 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HOXA9P31269 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA9P31269 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
HOXA9P31269 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA9P31269 AC011447.7-201ENST00000624228 1590 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 IGKV7-3-201ENST00000357453 298 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 OR51B3P-201ENST00000412287 913 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 VN1R37P-201ENST00000419096 748 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AC234779.1-201ENST00000425910 285 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA9P31269 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA9P31269 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA9P31269 SNRPFP2-201ENST00000440710 251 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 MRPL35P2-201ENST00000448009 511 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AC079168.2-201ENST00000453977 416 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AC114982.2-201ENST00000461396 358 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXA9P31269 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 AC069304.1-201ENST00000491593 704 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AC093840.1-201ENST00000511599 336 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 RPL23AP53-201ENST00000521854 457 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXA9P31269 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA9P31269 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms