Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CLIP1P30622 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 KCTD10P1-201ENST00000434203 625 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 CYCSP34-201ENST00000458172 304 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 RPS27AP16-201ENST00000492222 470 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP1P30622 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
CLIP1P30622 OR8A2P-201ENST00000528631 952 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP1P30622 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 BPIFA4P-203ENST00000603168 689 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP1P30622 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP1P30622 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CLIP1P30622 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP1P30622 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
CLIP1P30622 AC097063.1-201ENST00000426714 1797 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP1P30622 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CLIP1P30622 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP1P30622 ST13P16-201ENST00000401760 781 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 CTSL3P-202ENST00000412179 788 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP1P30622 NPM1P26-201ENST00000426339 738 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.18□□□□□ -1.26
CLIP1P30622 RPS27AP12-201ENST00000429552 465 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 RPS3AP54-201ENST00000435535 734 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 ACTR3P2-201ENST00000439585 1257 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP1P30622 RN7SL98P-201ENST00000462271 300 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 NPM1P28-201ENST00000492269 840 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AC106806.2-201ENST00000509365 500 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP1P30622 MRPL49P2-201ENST00000521066 465 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AP000619.2-201ENST00000546014 969 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 MIR3138-201ENST00000585238 82 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 AL109618.2-201ENST00000605527 211 ntBASIC7.18□□□□□ -1.26
CLIP1P30622 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP1P30622 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
CLIP1P30622 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 EI24P3-201ENST00000399046 1062 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 RPL21P91-201ENST00000429231 479 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.17□□□□□ -1.26
CLIP1P30622 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP1P30622 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.17□□□□□ -1.26
CLIP1P30622 RPL7P32-201ENST00000457119 744 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 RN7SL810P-201ENST00000493031 276 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 RNA5SP446-201ENST00000515955 82 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
CLIP1P30622 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP1P30622 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP1P30622 AC114781.5-201ENST00000615297 108 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 AC006065.6-201ENST00000625201 545 ntBASIC7.17□□□□□ -1.26
CLIP1P30622 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CLIP1P30622 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP1P30622 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 AC139769.1-204ENST00000472297 1931 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
CLIP1P30622 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.16□□□□□ -1.26
CLIP1P30622 AL592182.3-201ENST00000642132 3304 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP1P30622 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CLIP1P30622 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CLIP1P30622 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.16□□□□□ -1.26
CLIP1P30622 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 AC025031.4-201ENST00000621248 3271 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.16□□□□□ -1.26
CLIP1P30622 RPL36AP10-201ENST00000421785 322 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 RPS12P10-201ENST00000427031 377 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 RN7SL303P-201ENST00000469773 251 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP1P30622 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP1P30622 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP1P30622 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP1P30622 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.16□□□□□ -1.26
CLIP1P30622 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP1P30622 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP1P30622 AC000374.1-201ENST00000434698 1745 ntBASIC7.16□□□□□ -1.26
CLIP1P30622 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.16□□□□□ -1.26
CLIP1P30622 AC090017.1-201ENST00000548612 1779 ntBASIC7.15□□□□□ -1.26
CLIP1P30622 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP1P30622 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP1P30622 AL583835.1-201ENST00000399570 407 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms