Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SAMMSON-210ENST00000641260 1308 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 AC063976.2-201ENST00000425667 3556 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 CDC27P2-201ENST00000425026 1922 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 ZNF137P-201ENST00000456718 1920 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 SNORA70C-201ENST00000384538 135 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 CR848007.2-201ENST00000424918 787 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 AL158073.1-201ENST00000426848 1104 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
TM4SF1P30408 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.92□□□□□ -1.46
TM4SF1P30408 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.92□□□□□ -1.46
TM4SF1P30408 H2AFZP5-201ENST00000446960 382 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 NUTF2P3-201ENST00000448540 384 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.92□□□□□ -1.46
TM4SF1P30408 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.92□□□□□ -1.46
TM4SF1P30408 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.92□□□□□ -1.46
TM4SF1P30408 AC091167.1-201ENST00000492017 396 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 MTCO1P35-201ENST00000515270 228 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.92□□□□□ -1.46
TM4SF1P30408 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 SNORD39.2-201ENST00000579995 76 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 AL159169.2-201ENST00000610061 1269 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 RMST_5.1-201ENST00000618704 126 ntBASIC5.92□□□□□ -1.46
TM4SF1P30408 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM4SF1P30408 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.92□□□□□ -1.46
TM4SF1P30408 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.92□□□□□ -1.46
TM4SF1P30408 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
TM4SF1P30408 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AL022323.4-201ENST00000623980 13120 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 CCAT2-201ENST00000630920 1752 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC021146.4-201ENST00000309229 279 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 RNA5SP105-201ENST00000391123 113 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 AC025750.1-201ENST00000399891 379 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.91□□□□□ -1.46
TM4SF1P30408 FTH1P16-201ENST00000435241 552 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 CCRL1P1-201ENST00000449542 1053 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.91□□□□□ -1.46
TM4SF1P30408 RNU6-491P-201ENST00000516099 110 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 RNU6-709P-201ENST00000517257 104 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC010476.1-201ENST00000519111 851 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.91□□□□□ -1.46
TM4SF1P30408 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC034105.4-201ENST00000568304 277 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 ZYXP1-201ENST00000617638 118 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 AP005019.3-201ENST00000620418 560 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 U3.53-201ENST00000628922 216 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 AL122126.1-201ENST00000546905 1318 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 UGT2B26P-201ENST00000508672 1613 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TM4SF1P30408 AC025031.4-201ENST00000621248 3271 ntBASIC5.91□□□□□ -1.46
TM4SF1P30408 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.91□□□□□ -1.46
TM4SF1P30408 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.91□□□□□ -1.46
TM4SF1P30408 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 AC004817.4-201ENST00000602396 3625 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.9□□□□□ -1.46
TM4SF1P30408 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 AL121657.1-201ENST00000327215 531 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TM4SF1P30408 SNORA27.3-201ENST00000364937 134 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 MIR659-201ENST00000384963 97 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.9□□□□□ -1.46
TM4SF1P30408 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.9□□□□□ -1.46
TM4SF1P30408 MTND4LP14-201ENST00000429447 288 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 AL359073.1-201ENST00000448036 403 ntBASIC5.9□□□□□ -1.46
TM4SF1P30408 NIFKP7-201ENST00000503365 834 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms