Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC234771.2-201ENST00000445718 597 ntBASIC7.34□□□□□ -1.23
RFX1P22670 MTND2P24-201ENST00000453434 806 ntBASIC7.34□□□□□ -1.23
RFX1P22670 HMGN3P1-201ENST00000453847 193 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX1P22670 RN7SL37P-201ENST00000490461 307 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX1P22670 POU5F1P7-201ENST00000508759 541 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX1P22670 AP004247.1-201ENST00000531556 1289 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX1P22670 MIR5697-201ENST00000578045 78 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX1P22670 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX1P22670 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX1P22670 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX1P22670 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX1P22670 AL353621.2-201ENST00000605340 133 ntBASIC7.34□□□□□ -1.23
RFX1P22670 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX1P22670 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.34□□□□□ -1.23
RFX1P22670 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
RFX1P22670 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX1P22670 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 AC134882.1-201ENST00000603738 1676 ntBASIC7.34□□□□□ -1.23
RFX1P22670 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX1P22670 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX1P22670 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RFX1P22670 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX1P22670 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
RFX1P22670 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX1P22670 MROH3P-201ENST00000435735 2676 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC217777.1-201ENST00000570034 1471 ntBASIC7.33□□□□□ -1.24
RFX1P22670 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 Y_RNA.9-201ENST00000362354 101 ntBASIC7.33□□□□□ -1.24
RFX1P22670 RN7SKP191-201ENST00000364713 306 ntBASIC7.33□□□□□ -1.24
RFX1P22670 RNA5SP152-201ENST00000365184 110 ntBASIC7.33□□□□□ -1.24
RFX1P22670 MIR1277-201ENST00000408536 78 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 AC007742.1-201ENST00000425789 329 ntBASIC7.33□□□□□ -1.24
RFX1P22670 TIMM9P3-201ENST00000428659 274 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC109583.1-201ENST00000432156 268 ntBASIC7.33□□□□□ -1.24
RFX1P22670 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 ELOCP26-201ENST00000436067 329 ntBASIC7.33□□□□□ -1.24
RFX1P22670 RPS10P18-201ENST00000442662 495 ntBASIC7.33□□□□□ -1.24
RFX1P22670 BMS1P10-201ENST00000443754 1120 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 RN7SL561P-201ENST00000488553 281 ntBASIC7.33□□□□□ -1.24
RFX1P22670 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.33□□□□□ -1.24
RFX1P22670 DUTP7-201ENST00000507982 486 ntBASIC7.33□□□□□ -1.24
RFX1P22670 KCTD9P2-201ENST00000512203 1013 ntBASIC7.33□□□□□ -1.24
RFX1P22670 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RFX1P22670 AC011853.1-201ENST00000518911 454 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC008429.4-201ENST00000521201 182 ntBASIC7.33□□□□□ -1.24
RFX1P22670 OR5M7P-201ENST00000526140 972 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.33□□□□□ -1.24
RFX1P22670 DPPA2P4-201ENST00000563717 878 ntBASIC7.33□□□□□ -1.24
RFX1P22670 LINC00556-201ENST00000569603 412 ntBASIC7.33□□□□□ -1.24
RFX1P22670 CTSLP2-201ENST00000580501 394 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 RPS4XP21-201ENST00000603814 750 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AL359704.2-201ENST00000604335 521 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX1P22670 AL592295.2-201ENST00000612578 206 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AC104985.2-201ENST00000620598 500 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AL683826.1-201ENST00000624104 627 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AP003400.5-201ENST00000624827 617 ntBASIC7.33□□□□□ -1.24
RFX1P22670 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.33□□□□□ -1.24
RFX1P22670 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 AC025809.2-201ENST00000625085 1802 ntBASIC7.33□□□□□ -1.24
RFX1P22670 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RFX1P22670 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 AC127070.3-201ENST00000503695 3263 ntBASIC7.33□□□□□ -1.24
RFX1P22670 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX1P22670 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 DLEU2L-201ENST00000371086 3555 ntBASIC7.33□□□□□ -1.24
RFX1P22670 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX1P22670 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 TATDN2P3-201ENST00000452855 3665 ntBASIC7.32□□□□□ -1.24
RFX1P22670 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 KYNUP3-201ENST00000574386 1341 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms