Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPS27AP17-201ENST00000463344 455 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 RNA5SP446-201ENST00000515955 82 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 CDH12P4-201ENST00000517835 295 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 CDH12P3-201ENST00000517935 295 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 CDH12P1-201ENST00000518435 295 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL3L1P16619 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 RPL12P25-202ENST00000598100 674 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 AC125494.2-201ENST00000602431 657 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 AC023762.1-201ENST00000603280 584 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 AC008782.1-201ENST00000603386 430 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 MIR6820-201ENST00000611508 62 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AC005086.4-201ENST00000623065 213 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 AC091905.2-201ENST00000623143 306 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 AL442128.2-201ENST00000620246 1824 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL3L1P16619 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 AC092435.4-201ENST00000623012 4159 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 LINC01355-201ENST00000566551 5444 ntBASIC3.71□□□□□ -1.82
CCL3L1P16619 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCL3L1P16619 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL3L1P16619 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL3L1P16619 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCL3L1P16619 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 AC120338.1-201ENST00000625074 1541 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 MFSD8-216ENST00000641147 4009 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 ICE2P1-201ENST00000512800 1849 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL3L1P16619 RAD17P1-201ENST00000418130 2042 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 AP001642.1-201ENST00000624727 2117 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.7□□□□□ -1.82
CCL3L1P16619 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 RNA5SP151-201ENST00000365632 117 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCL3L1P16619 SDHCP2-201ENST00000398565 501 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 RPS3AP23-201ENST00000401762 784 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AL359643.1-201ENST00000404109 423 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 NPM1P26-201ENST00000426339 738 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 RPL23AP1-201ENST00000428990 471 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 RPL23AP25-201ENST00000430973 463 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 RPL23AP43-201ENST00000446445 471 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.7□□□□□ -1.82
CCL3L1P16619 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 AC012671.1-201ENST00000451912 203 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 MTND2P28-201ENST00000457540 1044 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 RN7SL459P-201ENST00000481078 302 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 AK3P4-201ENST00000504283 583 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL3L1P16619 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.7□□□□□ -1.82
CCL3L1P16619 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.7□□□□□ -1.82
CCL3L1P16619 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CCL3L1P16619 AC084783.1-201ENST00000565846 910 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AC027455.1-201ENST00000574104 594 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AC020915.5-201ENST00000596836 964 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AC234771.5-201ENST00000600161 514 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AC090181.2-201ENST00000602975 672 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL3L1P16619 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.7□□□□□ -1.82
CCL3L1P16619 AP005019.3-201ENST00000620418 560 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 LINC00622-201ENST00000562811 1570 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL3L1P16619 CASC19-204ENST00000641001 2055 ntBASIC3.7□□□□□ -1.82
CCL3L1P16619 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL3L1P16619 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL3L1P16619 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCL3L1P16619 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCL3L1P16619 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCL3L1P16619 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.69□□□□□ -1.82
CCL3L1P16619 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCL3L1P16619 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCL3L1P16619 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.69□□□□□ -1.82
CCL3L1P16619 AL078595.2-201ENST00000605309 1780 ntBASIC3.69□□□□□ -1.82
CCL3L1P16619 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms