Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 GAPDHP14-201ENST00000450472 937 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 AZGP1P2-201ENST00000454506 345 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 CDC42P1-201ENST00000456658 548 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 NDUFA5P5-201ENST00000468361 342 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AC094085.1-201ENST00000468914 584 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P09429 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 RN7SKP234-201ENST00000517173 224 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 CYCSP22-201ENST00000517555 339 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC104072.1-201ENST00000568817 668 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC017100.2-201ENST00000584628 355 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 AC013468.1-201ENST00000608680 598 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGB1P09429 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 AP002505.2-201ENST00000623585 696 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HMGB1P09429 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.61□□□□□ -1.35
HMGB1P09429 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 OR55B1P-203ENST00000641518 2602 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 AC015799.1-201ENST00000622996 3122 ntBASIC6.61□□□□□ -1.35
HMGB1P09429 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P09429 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P09429 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC068870.1-201ENST00000563737 2455 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC025263.3-201ENST00000622965 1396 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB1P09429 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 MIR153-1-201ENST00000384914 90 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMGB1P09429 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 DSTNP4-201ENST00000399472 474 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 RNU2-21P-201ENST00000410368 188 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 TAF13P2-201ENST00000416876 286 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 RPL34P3-201ENST00000421454 338 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AC234779.1-201ENST00000425910 285 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AC092447.2-201ENST00000435487 669 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AL450996.1-201ENST00000445574 1202 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 TRY2P-201ENST00000448860 689 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 Z95152.1-201ENST00000453556 656 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AC091959.2-201ENST00000477363 321 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC097486.1-201ENST00000515331 210 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC068339.2-201ENST00000534395 618 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB1P09429 MIR4504-201ENST00000577413 92 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGB1P09429 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.6□□□□□ -1.35
HMGB1P09429 AC025574.2-201ENST00000615621 514 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 AC253576.2-201ENST00000618815 580 ntBASIC6.6□□□□□ -1.35
HMGB1P09429 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB1P09429 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGB1P09429 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGB1P09429 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGB1P09429 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB1P09429 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB1P09429 LINC01109-201ENST00000603837 3081 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 AC107081.3-201ENST00000612715 2034 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 SRRM1P3-201ENST00000426911 2678 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB1P09429 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB1P09429 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
HMGB1P09429 MIR621-201ENST00000384919 96 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 U3.28-201ENST00000391249 210 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 LYPLA1P3-201ENST00000402650 695 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB1P09429 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB1P09429 AL009174.1-201ENST00000426577 416 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 AL513175.1-201ENST00000431492 780 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB1P09429 AL358876.1-201ENST00000453364 1075 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 RPS27AP2-201ENST00000457576 465 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGB1P09429 RNU7-140P-201ENST00000459546 60 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
HMGB1P09429 AC087385.1-201ENST00000475062 312 ntBASIC6.59□□□□□ -1.35
HMGB1P09429 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGB1P09429 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGB1P09429 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGB1P09429 RN7SKP277-201ENST00000516895 283 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms