Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.56□□□□□ -1.36
PDGFAP04085 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 EEF1B2P1-201ENST00000567221 672 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.56□□□□□ -1.36
PDGFAP04085 CKS1BP3-201ENST00000600888 237 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 BCRP9-201ENST00000605312 388 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC097381.3-201ENST00000608962 462 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC019193.2-201ENST00000610012 634 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 AC091905.1-201ENST00000624400 311 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 TMCC1P1-201ENST00000518897 1980 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 OR5M2P-202ENST00000641241 4242 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 Y_RNA.279-201ENST00000364763 95 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 Y_RNA.481-201ENST00000384373 102 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AL049693.1-201ENST00000402760 611 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 HMGB1P17-201ENST00000403495 628 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 RN7SKP188-201ENST00000410789 317 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 GAPDHP57-201ENST00000424400 585 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 PSMD10P2-201ENST00000432890 672 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.55□□□□□ -1.36
PDGFAP04085 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 AL354714.5-201ENST00000450131 590 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 HMGN3P1-201ENST00000453847 193 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 SULT1D1P-201ENST00000458020 882 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 GLRXP3-201ENST00000470810 321 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 RN7SL70P-201ENST00000478322 302 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 RPL37P23-201ENST00000492641 294 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC006390.1-201ENST00000508068 283 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 RNU6-202P-201ENST00000515998 96 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 RNU6-1281P-201ENST00000516223 105 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 OR4A12P-201ENST00000530847 918 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AP003122.4-201ENST00000530980 758 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 HMGB1P42-201ENST00000532126 553 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 OR5AN2P-201ENST00000534535 896 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 MIR4637-201ENST00000582405 84 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 HMGN1P30-201ENST00000589286 268 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 RPL12P25-202ENST00000598100 674 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 AL390877.1-201ENST00000605704 214 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AC009159.1-201ENST00000618386 642 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC139792.3-201ENST00000623525 224 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AP002505.2-201ENST00000623585 696 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 AC099667.1-201ENST00000624222 469 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 AC024614.3-201ENST00000637860 256 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms