Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 MTCO1P24-201ENST00000515438 1558 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC011447.7-201ENST00000624228 1590 ntBASIC1.98□□□□□ -2.09
USH2AO75445 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 SDHCP2-201ENST00000398565 501 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC140479.3-201ENST00000418944 1126 ntBASIC1.98□□□□□ -2.09
USH2AO75445 RN7SL517P-201ENST00000462240 305 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 AC087477.6-201ENST00000559595 843 ntBASIC1.98□□□□□ -2.09
USH2AO75445 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AC245060.6-201ENST00000624350 8420 ntBASIC1.98□□□□□ -2.09
USH2AO75445 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 CR1-203ENST00000367051 7469 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 CR1-204ENST00000367052 7469 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 CR1-205ENST00000367053 7469 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 AC005183.1-201ENST00000603687 1979 ntBASIC1.98□□□□□ -2.09
USH2AO75445 CPHL1P-201ENST00000461341 3407 ntBASIC1.98□□□□□ -2.09
USH2AO75445 CBX1P3-201ENST00000413296 527 ntBASIC1.98□□□□□ -2.09
USH2AO75445 AL590806.1-201ENST00000415818 853 ntBASIC1.98□□□□□ -2.09
USH2AO75445 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 IGKV2OR2-2-201ENST00000605025 300 ntBASIC1.98□□□□□ -2.09
USH2AO75445 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC1.98□□□□□ -2.09
USH2AO75445 AC135352.1-201ENST00000506173 1418 ntBASIC1.98□□□□□ -2.09
USH2AO75445 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC1.98□□□□□ -2.09
USH2AO75445 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
USH2AO75445 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
USH2AO75445 AP000997.2-201ENST00000564619 8400 ntBASIC1.97□□□□□ -2.09
USH2AO75445 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
USH2AO75445 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 RPL7P44-201ENST00000424827 742 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 AC116533.1-201ENST00000459748 321 ntBASIC1.97□□□□□ -2.09
USH2AO75445 RPL7P23-201ENST00000493874 747 ntBASIC1.97□□□□□ -2.09
USH2AO75445 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 AC084824.2-201ENST00000548906 345 ntBASIC1.97□□□□□ -2.09
USH2AO75445 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
USH2AO75445 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AC083899.2-201ENST00000423285 1376 ntBASIC1.97□□□□□ -2.09
USH2AO75445 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AC092821.2-201ENST00000545710 2042 ntBASIC1.97□□□□□ -2.09
USH2AO75445 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 RPL12P9-201ENST00000412942 488 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 MFSD13B-201ENST00000420133 1290 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 RNF19BPX-201ENST00000426224 625 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 RPS20P21-201ENST00000466859 343 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL592156.1-201ENST00000508758 304 ntBASIC1.97□□□□□ -2.09
USH2AO75445 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
USH2AO75445 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 PYM1-205ENST00000547925 499 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms