Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRKNO60260 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 AC106754.1-201ENST00000562632 1513 ntBASIC4.68□□□□□ -1.66
PRKNO60260 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 AC004158.1-201ENST00000564508 4319 ntBASIC4.68□□□□□ -1.66
PRKNO60260 MTND5P23-201ENST00000430812 1655 ntBASIC4.68□□□□□ -1.66
PRKNO60260 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRKNO60260 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRKNO60260 RN7SKP95-201ENST00000362860 303 ntBASIC4.68□□□□□ -1.66
PRKNO60260 RN7SKP113-201ENST00000363891 295 ntBASIC4.68□□□□□ -1.66
PRKNO60260 SNORA51.8-201ENST00000384234 132 ntBASIC4.68□□□□□ -1.66
PRKNO60260 SNORA66-201ENST00000384792 133 ntBASIC4.68□□□□□ -1.66
PRKNO60260 CHMP1B2P-201ENST00000399581 597 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL078599.1-201ENST00000402075 293 ntBASIC4.68□□□□□ -1.66
PRKNO60260 SNORA77-201ENST00000408716 125 ntBASIC4.68□□□□□ -1.66
PRKNO60260 OR13Z1P-201ENST00000416141 834 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 SNRPFP2-201ENST00000440710 251 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL096829.2-201ENST00000446582 742 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 GAPDHP14-201ENST00000450472 937 ntBASIC4.68□□□□□ -1.66
PRKNO60260 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.68□□□□□ -1.66
PRKNO60260 RPS3AP53-201ENST00000454716 778 ntBASIC4.68□□□□□ -1.66
PRKNO60260 SEPT7P3-201ENST00000455017 621 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC091180.1-201ENST00000462104 372 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC090602.1-201ENST00000469695 252 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 AC005412.2-201ENST00000492004 341 ntBASIC4.68□□□□□ -1.66
PRKNO60260 SUMO1P1-201ENST00000497904 306 ntBASIC4.68□□□□□ -1.66
PRKNO60260 NDUFB5P1-201ENST00000508134 564 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.68□□□□□ -1.66
PRKNO60260 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.68□□□□□ -1.66
PRKNO60260 AC012339.2-201ENST00000523996 453 ntBASIC4.68□□□□□ -1.66
PRKNO60260 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.68□□□□□ -1.66
PRKNO60260 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 AC084759.1-201ENST00000561168 290 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC090666.1-201ENST00000578241 445 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC011840.5-201ENST00000582125 771 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 AC010487.1-201ENST00000594408 1172 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC005034.4-201ENST00000603612 899 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AC079880.2-201ENST00000603790 1213 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 AC008759.3-201ENST00000613300 508 ntBASIC4.68□□□□□ -1.66
PRKNO60260 EIF3FP1-201ENST00000613970 806 ntBASIC4.68□□□□□ -1.66
PRKNO60260 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.68□□□□□ -1.66
PRKNO60260 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRKNO60260 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.68□□□□□ -1.66
PRKNO60260 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.68□□□□□ -1.66
PRKNO60260 AL359715.4-201ENST00000606629 1436 ntBASIC4.68□□□□□ -1.66
PRKNO60260 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.68□□□□□ -1.66
PRKNO60260 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.68□□□□□ -1.66
PRKNO60260 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 AC007996.1-201ENST00000620414 2821 ntBASIC4.68□□□□□ -1.66
PRKNO60260 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRKNO60260 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRKNO60260 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 CASC19-221ENST00000641309 1382 ntBASIC4.67□□□□□ -1.66
PRKNO60260 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 INTS6P1-201ENST00000504674 2530 ntBASIC4.67□□□□□ -1.66
PRKNO60260 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 TATDN1P1-201ENST00000414123 891 ntBASIC4.67□□□□□ -1.66
PRKNO60260 BX664727.1-201ENST00000416024 466 ntBASIC4.67□□□□□ -1.66
PRKNO60260 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.67□□□□□ -1.66
PRKNO60260 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms