Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ELOCP11-201ENST00000436690 332 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 ELOCP16-201ENST00000444494 332 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 AC093166.2-201ENST00000455969 1017 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 RPL31P53-201ENST00000457065 348 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 snoU109.3-201ENST00000459477 145 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.21□□□□□ -1.58
SMAD6O43541 AC097173.1-201ENST00000505862 819 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 AC010468.3-201ENST00000508225 458 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC112673.1-201ENST00000513168 575 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.21□□□□□ -1.58
SMAD6O43541 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SMAD6O43541 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.21□□□□□ -1.58
SMAD6O43541 AC104115.2-201ENST00000523026 687 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.21□□□□□ -1.58
SMAD6O43541 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 CKS1BP1-201ENST00000555221 240 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.21□□□□□ -1.58
SMAD6O43541 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.21□□□□□ -1.58
SMAD6O43541 MIR4691-201ENST00000583764 85 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.21□□□□□ -1.58
SMAD6O43541 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.21□□□□□ -1.58
SMAD6O43541 AP001160.4-201ENST00000596971 382 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.21□□□□□ -1.58
SMAD6O43541 AL355802.4-201ENST00000607635 548 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 AC079395.3-201ENST00000615161 484 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AL355493.4-201ENST00000618530 292 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC084824.4-201ENST00000620106 731 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC112694.2-201ENST00000623697 768 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AP003476.1-201ENST00000623984 516 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 AL450345.1-202ENST00000605741 3881 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
SMAD6O43541 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 AL109941.1-201ENST00000401925 229 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 HSFY4P-201ENST00000415994 1181 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.2□□□□□ -1.58
SMAD6O43541 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 BX323845.1-201ENST00000432417 179 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 RAB9AP5-201ENST00000437794 597 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RPL12P3-201ENST00000440080 396 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RAB9AP2-201ENST00000443911 597 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 KNOP1P3-201ENST00000446933 426 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AL009048.1-201ENST00000450437 298 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RPL7P61-201ENST00000451721 751 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RN7SL97P-201ENST00000486780 299 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC117522.2-201ENST00000510049 657 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RNU6-334P-201ENST00000517072 102 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 OR8G5-201ENST00000524943 1041 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 NPM1P35-201ENST00000533043 868 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.2□□□□□ -1.58
SMAD6O43541 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 AC011270.1-201ENST00000558606 583 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 OR1F2P-201ENST00000570470 933 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms