Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 BMS1P3-201ENST00000372011 932 ntBASIC5.44□□□□□ -1.54
PROM1O43490 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.44□□□□□ -1.54
PROM1O43490 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 OR7E101P-201ENST00000400428 513 ntBASIC5.44□□□□□ -1.54
PROM1O43490 RNU4-72P-201ENST00000410754 173 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 ELOCP9-201ENST00000418624 239 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AK4P4-201ENST00000419465 646 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.44□□□□□ -1.54
PROM1O43490 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.44□□□□□ -1.54
PROM1O43490 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.44□□□□□ -1.54
PROM1O43490 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.44□□□□□ -1.54
PROM1O43490 ARL4AP3-201ENST00000441452 574 ntBASIC5.44□□□□□ -1.54
PROM1O43490 UBE2D3P4-201ENST00000441973 436 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 AL157827.1-201ENST00000447622 132 ntBASIC5.44□□□□□ -1.54
PROM1O43490 OR51B8P-201ENST00000449892 769 ntBASIC5.44□□□□□ -1.54
PROM1O43490 HMGB1P5-202ENST00000451497 985 ntBASIC5.44□□□□□ -1.54
PROM1O43490 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 RN7SL717P-201ENST00000478343 297 ntBASIC5.44□□□□□ -1.54
PROM1O43490 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 RPL7AP10-201ENST00000481016 791 ntBASIC5.44□□□□□ -1.54
PROM1O43490 RN7SL570P-201ENST00000484405 292 ntBASIC5.44□□□□□ -1.54
PROM1O43490 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 AC093890.1-201ENST00000502554 540 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC008638.1-201ENST00000506035 866 ntBASIC5.44□□□□□ -1.54
PROM1O43490 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.44□□□□□ -1.54
PROM1O43490 AC119751.1-201ENST00000513357 765 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC117532.1-201ENST00000514638 323 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC138938.1-201ENST00000515431 782 ntBASIC5.44□□□□□ -1.54
PROM1O43490 RNU5A-4P-201ENST00000516588 111 ntBASIC5.44□□□□□ -1.54
PROM1O43490 SNORA31.13-201ENST00000516624 135 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC021678.3-201ENST00000517893 476 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 OR5AM1P-201ENST00000532136 1032 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC006518.2-201ENST00000542513 940 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.44□□□□□ -1.54
PROM1O43490 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 AC092121.1-201ENST00000569452 202 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC015688.2-201ENST00000584523 262 ntBASIC5.44□□□□□ -1.54
PROM1O43490 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 MRPS35P3-201ENST00000603189 709 ntBASIC5.44□□□□□ -1.54
PROM1O43490 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.44□□□□□ -1.54
PROM1O43490 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PROM1O43490 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.44□□□□□ -1.54
PROM1O43490 AC016877.3-201ENST00000606778 504 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC019131.2-201ENST00000609071 870 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC013562.2-201ENST00000611632 603 ntBASIC5.44□□□□□ -1.54
PROM1O43490 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.44□□□□□ -1.54
PROM1O43490 AC007490.1-201ENST00000624321 703 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC092159.4-201ENST00000624944 550 ntBASIC5.44□□□□□ -1.54
PROM1O43490 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.44□□□□□ -1.54
PROM1O43490 ELL2P3-201ENST00000457883 1602 ntBASIC5.44□□□□□ -1.54
PROM1O43490 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.44□□□□□ -1.54
PROM1O43490 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.43□□□□□ -1.54
PROM1O43490 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 AC006484.1-201ENST00000435086 1884 ntBASIC5.43□□□□□ -1.54
PROM1O43490 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 AL159987.1-201ENST00000347911 293 ntBASIC5.43□□□□□ -1.54
PROM1O43490 RN7SKP149-201ENST00000363008 344 ntBASIC5.43□□□□□ -1.54
PROM1O43490 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 QRSL1P2-201ENST00000418582 964 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.43□□□□□ -1.54
PROM1O43490 AC023128.2-201ENST00000420880 1223 ntBASIC5.43□□□□□ -1.54
PROM1O43490 RNGTTP1-201ENST00000420965 728 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC246680.2-201ENST00000422106 389 ntBASIC5.43□□□□□ -1.54
PROM1O43490 BX510359.3-201ENST00000422168 306 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC006065.1-201ENST00000422539 802 ntBASIC5.43□□□□□ -1.54
PROM1O43490 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 AL390023.1-201ENST00000428836 262 ntBASIC5.43□□□□□ -1.54
PROM1O43490 MTND1P20-201ENST00000430341 950 ntBASIC5.43□□□□□ -1.54
PROM1O43490 NPM1P18-201ENST00000434232 732 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC099670.2-201ENST00000435130 321 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 AC118469.1-201ENST00000442943 488 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms