Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 OR10AB1P-202ENST00000641219 1686 ntBASIC4.7□□□□□ -1.66
LSM1O15116 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LSM1O15116 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LSM1O15116 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LSM1O15116 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LSM1O15116 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.69□□□□□ -1.66
LSM1O15116 U3.36-201ENST00000408418 213 ntBASIC4.69□□□□□ -1.66
LSM1O15116 RNA5SP345-201ENST00000410646 108 ntBASIC4.69□□□□□ -1.66
LSM1O15116 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 FABP7P2-201ENST00000429946 379 ntBASIC4.69□□□□□ -1.66
LSM1O15116 RHOT1P3-201ENST00000436571 331 ntBASIC4.69□□□□□ -1.66
LSM1O15116 MTCO3P17-201ENST00000443775 513 ntBASIC4.69□□□□□ -1.66
LSM1O15116 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 RN7SL97P-201ENST00000486780 299 ntBASIC4.69□□□□□ -1.66
LSM1O15116 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LSM1O15116 AC072052.1-201ENST00000496556 306 ntBASIC4.69□□□□□ -1.66
LSM1O15116 SNRPCP2-201ENST00000504370 475 ntBASIC4.69□□□□□ -1.66
LSM1O15116 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 IGKV3D-34-201ENST00000522638 302 ntBASIC4.69□□□□□ -1.66
LSM1O15116 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 AC087477.6-201ENST00000559595 843 ntBASIC4.69□□□□□ -1.66
LSM1O15116 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LSM1O15116 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.69□□□□□ -1.66
LSM1O15116 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.69□□□□□ -1.66
LSM1O15116 ELOCP28-201ENST00000590044 317 ntBASIC4.69□□□□□ -1.66
LSM1O15116 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 AL139286.1-201ENST00000604465 483 ntBASIC4.69□□□□□ -1.66
LSM1O15116 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 AC243960.7-201ENST00000623532 707 ntBASIC4.69□□□□□ -1.66
LSM1O15116 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
LSM1O15116 AC006453.5-201ENST00000636451 619 ntBASIC4.69□□□□□ -1.66
LSM1O15116 AL672167.1-205ENST00000641112 3080 ntBASIC4.69□□□□□ -1.66
LSM1O15116 MAPK10-304ENST00000641341 3984 ntBASIC4.69□□□□□ -1.66
LSM1O15116 AL359922.3-201ENST00000624779 1670 ntBASIC4.69□□□□□ -1.66
LSM1O15116 AL133268.1-201ENST00000405676 1401 ntBASIC4.69□□□□□ -1.66
LSM1O15116 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.69□□□□□ -1.66
LSM1O15116 CASC19-281ENST00000642118 1554 ntBASIC4.69□□□□□ -1.66
LSM1O15116 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LSM1O15116 THAP12P4-201ENST00000528321 2266 ntBASIC4.69□□□□□ -1.66
LSM1O15116 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.68□□□□□ -1.66
LSM1O15116 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 AL121950.1-201ENST00000624993 2077 ntBASIC4.68□□□□□ -1.66
LSM1O15116 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC139713.2-215ENST00000641428 5037 ntBASIC4.68□□□□□ -1.66
LSM1O15116 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 MIR448-201ENST00000362131 111 ntBASIC4.68□□□□□ -1.66
LSM1O15116 RNU4-7P-201ENST00000364758 141 ntBASIC4.68□□□□□ -1.66
LSM1O15116 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.68□□□□□ -1.66
LSM1O15116 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.68□□□□□ -1.66
LSM1O15116 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 TBCAP2-201ENST00000416175 326 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.68□□□□□ -1.66
LSM1O15116 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.68□□□□□ -1.66
LSM1O15116 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
LSM1O15116 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.68□□□□□ -1.66
LSM1O15116 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.68□□□□□ -1.66
LSM1O15116 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 AL391987.1-201ENST00000441025 200 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC099063.2-201ENST00000446360 662 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.68□□□□□ -1.66
LSM1O15116 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
LSM1O15116 RPL23AP2-201ENST00000471227 466 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC022336.1-201ENST00000475510 337 ntBASIC4.68□□□□□ -1.66
LSM1O15116 RN7SL222P-201ENST00000476452 299 ntBASIC4.68□□□□□ -1.66
LSM1O15116 RN7SL244P-201ENST00000493405 297 ntBASIC4.68□□□□□ -1.66
LSM1O15116 PRELID3BP7-201ENST00000503606 469 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 RNA5SP392-201ENST00000516905 112 ntBASIC4.68□□□□□ -1.66
LSM1O15116 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.68□□□□□ -1.66
LSM1O15116 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LSM1O15116 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.68□□□□□ -1.66
LSM1O15116 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.68□□□□□ -1.66
LSM1O15116 IMMP1LP1-201ENST00000605170 488 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.68□□□□□ -1.66
LSM1O15116 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.68□□□□□ -1.66
LSM1O15116 RMST_9.1-201ENST00000619945 193 ntBASIC4.68□□□□□ -1.66
LSM1O15116 AC012414.7-202ENST00000622705 1090 ntBASIC4.68□□□□□ -1.66
LSM1O15116 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LSM1O15116 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.68□□□□□ -1.66
LSM1O15116 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms