Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CDY12P-201ENST00000440679 1015 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 EEF1B2P5-201ENST00000444820 548 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 CDY13P-201ENST00000445813 1015 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 SEPT14P24-201ENST00000447236 180 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 RPS26P41-201ENST00000450370 284 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 CBX1P2-201ENST00000453841 458 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 RPL7AP52-201ENST00000458096 790 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 RNU1-88P-201ENST00000459274 128 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 RPL7P40-201ENST00000481703 745 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC090638.1-201ENST00000498296 909 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 SUMO2P5-201ENST00000506790 245 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 HIGD1AP14-201ENST00000507617 282 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 MTND1P22-201ENST00000510572 951 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 MTND2P32-201ENST00000521584 1038 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC138832.1-201ENST00000522871 556 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC004825.1-201ENST00000555068 586 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 ATP5F1P7-201ENST00000567330 760 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 MIR4789-201ENST00000577469 82 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AL606834.3-201ENST00000602615 496 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC090525.3-201ENST00000605601 189 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 MIR7155-201ENST00000615925 56 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC037198.3-201ENST00000616754 526 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AL121890.3-201ENST00000618494 516 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC022079.2-201ENST00000619739 566 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC132068.1-201ENST00000623805 459 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 GVINP1-202ENST00000531871 7271 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 RNA5SP30-201ENST00000365552 115 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 DNAJC19P6-201ENST00000401853 280 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 LIPT1P1-201ENST00000415870 1186 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 LINC01881-201ENST00000416103 412 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AL139148.1-201ENST00000427122 680 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 RPL7L1P9-201ENST00000431298 745 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 MTCO2P20-201ENST00000437339 673 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 CNOT7P2-201ENST00000441051 832 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM38O00635 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TRIM38O00635 SNORD125-201ENST00000459538 96 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 RN7SL51P-201ENST00000468230 285 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 RPS27AP16-201ENST00000492222 470 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC117522.2-201ENST00000510049 657 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC074255.1-201ENST00000511259 501 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC020937.1-201ENST00000519677 1013 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC023538.1-201ENST00000534576 736 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 CYB5AP5-201ENST00000549779 389 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms